Analysis of interatomic Contacts of Structural Units in PDB entry:
3OQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OQ0 entry

There are 10 chains in PDB entry 3OQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 120HIS 220
B
 ASP 123ASP 215
C
 ARG 122LEU 221
D
 ARG 122THR 224
E
 ASP 123ASP 217
F
 MSE 120HIS 220
G
 ASP 123ASP 215
H
 ARG 122LEU 221
I
 ARG 122THR 224
J
 ASP 123ASP 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3OQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
137 159Right-handed alpha
Helix 2
2
A
178 185Right-handed 310
Helix 3
3
A
189 197Right-handed alpha
Helix 4
4
A
204 213Right-handed alpha
Helix 5
5
B
137 158Right-handed alpha
Helix 6
6
B
178 185Right-handed 310
Helix 7
7
B
189 197Right-handed alpha
Helix 8
8
B
204 214Right-handed alpha
Helix 9
9
C
137 158Right-handed alpha
Helix 10
10
C
181 185Right-handed 310
Helix 11
11
C
189 197Right-handed alpha
Helix 12
12
C
204 214Right-handed alpha
Helix 13
13
D
137 157Right-handed alpha
Helix 14
14
D
178 185Right-handed 310
Helix 15
15
D
189 197Right-handed alpha
Helix 16
16
D
204 214Right-handed alpha
Helix 17
17
D
217 224Right-handed alpha
Helix 18
18
E
137 158Right-handed alpha
Helix 19
19
E
178 185Right-handed 310
Helix 20
20
E
189 197Right-handed alpha
Helix 21
21
E
203 213Right-handed alpha
Helix 22
22
F
137 159Right-handed alpha
Helix 23
23
F
178 185Right-handed 310
Helix 24
24
F
189 197Right-handed alpha
Helix 25
25
F
204 213Right-handed alpha
Helix 26
26
G
137 158Right-handed alpha
Helix 27
27
G
178 185Right-handed 310
Helix 28
28
G
189 197Right-handed alpha
Helix 29
29
G
204 214Right-handed alpha
Helix 30
30
H
137 158Right-handed alpha
Helix 31
31
H
181 185Right-handed 310
Helix 32
32
H
189 197Right-handed alpha
Helix 33
33
H
204 214Right-handed alpha
Helix 34
34
I
137 157Right-handed alpha
Helix 35
35
I
178 185Right-handed 310
Helix 36
36
I
189 197Right-handed alpha
Helix 37
37
I
204 214Right-handed alpha
Helix 38
38
I
217 224Right-handed alpha
Helix 39
39
J
137 158Right-handed alpha
Helix 40
40
J
178 185Right-handed 310
Helix 41
41
J
189 197Right-handed alpha
Helix 42
42
J
203 213Right-handed alpha
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There are 10 sheets in PDB entry 3OQ0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 203first strand
Strand 2
A
172 175parallel
Strand 3
A
125 128parallel
Strand 4
A
161 163parallel
Strand 5
B
134 135anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 203first strand
Strand 2
B
172 175parallel
Strand 3
B
125 128parallel
Strand 4
B
161 163parallel
Strand 5
C
134 135anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 203first strand
Strand 2
C
172 175parallel
Strand 3
C
125 128parallel
Strand 4
C
161 163parallel
Strand 5
D
134 135anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
126 128first strand
Strand 2
D
172 175parallel
Strand 3
D
200 203parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
161 162first strand
Strand 2
E
125 128parallel
Strand 3
E
172 174parallel
Strand 4
E
200 202parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
200 203first strand
Strand 2
F
172 175parallel
Strand 3
F
125 128parallel
Strand 4
F
161 163parallel
Strand 5
G
134 135anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
200 203first strand
Strand 2
G
172 175parallel
Strand 3
G
125 128parallel
Strand 4
G
161 163parallel
Strand 5
H
134 135anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
200 203first strand
Strand 2
H
172 175parallel
Strand 3
H
125 128parallel
Strand 4
H
161 163parallel
Strand 5
I
134 135anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
126 128first strand
Strand 2
I
172 175parallel
Strand 3
I
200 203parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
161 162first strand
Strand 2
J
125 128parallel
Strand 3
J
172 174parallel
Strand 4
J
200 202parallel
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