Analysis of interatomic Contacts of Structural Units in PDB entry:
3OQ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OQ1 entry

There are 4 chains in PDB entry 3OQ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 21SER 281
B
 GLN 21ASP 287
C
 GLN 21PHE 289
D
 GLN 21SER 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 3OQ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
38
A
28 32Right-handed 310
Helix 2
39
A
44 56Right-handed alpha
Helix 3
40
A
69 80Right-handed alpha
Helix 4
41
A
95 109Right-handed alpha
Helix 5
42
A
132 144Right-handed alpha
Helix 6
43
A
144 162Right-handed alpha
Helix 7
44
A
172 174Right-handed 310
Helix 8
45
A
180 203Right-handed alpha
Helix 9
46
A
220 228Right-handed alpha
Helix 10
47
A
237 251Right-handed alpha
Helix 11
48
A
263 268Right-handed alpha
Helix 12
49
A
270 281Right-handed alpha
Helix 13
14
B
28 32Right-handed 310
Helix 14
15
B
44 57Right-handed alpha
Helix 15
16
B
67 82Right-handed alpha
Helix 16
17
B
95 110Right-handed alpha
Helix 17
18
B
132 144Right-handed alpha
Helix 18
19
B
144 161Right-handed alpha
Helix 19
20
B
172 174Right-handed 310
Helix 20
21
B
180 204Right-handed alpha
Helix 21
22
B
220 228Right-handed alpha
Helix 22
23
B
237 251Right-handed alpha
Helix 23
24
B
263 268Right-handed alpha
Helix 24
25
B
270 281Right-handed alpha
Helix 25
1
C
28 32Right-handed 310
Helix 26
2
C
44 57Right-handed alpha
Helix 27
3
C
67 81Right-handed alpha
Helix 28
4
C
95 110Right-handed alpha
Helix 29
5
C
132 144Right-handed alpha
Helix 30
6
C
144 161Right-handed alpha
Helix 31
7
C
170 174Right-handed 310
Helix 32
8
C
180 204Right-handed alpha
Helix 33
9
C
220 228Right-handed alpha
Helix 34
10
C
237 251Right-handed alpha
Helix 35
11
C
263 268Right-handed alpha
Helix 36
12
C
270 280Right-handed alpha
Helix 37
13
C
281 283Right-handed 310
Helix 38
26
D
28 33Right-handed 310
Helix 39
27
D
44 57Right-handed alpha
Helix 40
28
D
67 81Right-handed alpha
Helix 41
29
D
95 111Right-handed alpha
Helix 42
30
D
132 144Right-handed alpha
Helix 43
31
D
144 162Right-handed alpha
Helix 44
32
D
172 174Right-handed 310
Helix 45
33
D
180 205Right-handed alpha
Helix 46
34
D
220 227Right-handed alpha
Helix 47
35
D
237 251Right-handed alpha
Helix 48
36
D
261 269Right-handed alpha
Helix 49
37
D
270 280Right-handed alpha
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There are 4 sheets in PDB entry 3OQ1. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 90first strand
Strand 2
C
60 65parallel
Strand 3
C
36 39parallel
Strand 4
C
115 118parallel
Strand 5
C
164 168parallel
Strand 6
C
209 215parallel
Strand 7
C
255 258parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 90first strand
Strand 2
B
60 65parallel
Strand 3
B
36 39parallel
Strand 4
B
115 118parallel
Strand 5
B
164 170parallel
Strand 6
B
209 215parallel
Strand 7
B
255 258parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
85 90first strand
Strand 2
D
60 65parallel
Strand 3
D
36 39parallel
Strand 4
D
115 118parallel
Strand 5
D
164 170parallel
Strand 6
D
209 215parallel
Strand 7
D
255 258parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
60 63parallel
Strand 3
A
36 39parallel
Strand 4
A
115 118parallel
Strand 5
A
164 170parallel
Strand 6
A
209 215parallel
Strand 7
A
255 258parallel
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