Analysis of interatomic Contacts of Structural Units in PDB entry:
3OQL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OQL entry

There are 4 chains in PDB entry 3OQL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3LEU 246
B
 ASP 3LEU 246
C
 ASP 3LEU 246
D
 ASP 3LEU 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 3OQL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 17Right-handed 310
Helix 2
2
A
18 37Right-handed alpha
Helix 3
3
A
38 46Right-handed alpha
Helix 4
4
A
50 77Right-handed alpha
Helix 5
5
A
84 101Right-handed alpha
Helix 6
6
A
103 114Right-handed alpha
Helix 7
7
A
118 125Right-handed alpha
Helix 8
8
A
128 131Right-handed 310
Helix 9
9
A
132 145Right-handed alpha
Helix 10
10
A
146 154Right-handed alpha
Helix 11
11
A
156 171Right-handed alpha
Helix 12
12
A
173 178Right-handed alpha
Helix 13
13
A
180 196Right-handed alpha
Helix 14
14
A
200 214Right-handed alpha
Helix 15
15
A
218 246Right-handed alpha
Helix 16
16
B
13 17Right-handed 310
Helix 17
17
B
18 37Right-handed alpha
Helix 18
18
B
38 46Right-handed alpha
Helix 19
19
B
50 77Right-handed alpha
Helix 20
20
B
84 101Right-handed alpha
Helix 21
21
B
103 114Right-handed alpha
Helix 22
22
B
118 125Right-handed alpha
Helix 23
23
B
128 131Right-handed 310
Helix 24
24
B
132 145Right-handed alpha
Helix 25
25
B
146 154Right-handed alpha
Helix 26
26
B
156 171Right-handed alpha
Helix 27
27
B
173 178Right-handed alpha
Helix 28
28
B
180 196Right-handed alpha
Helix 29
29
B
200 214Right-handed alpha
Helix 30
30
B
218 246Right-handed alpha
Helix 31
31
C
13 17Right-handed 310
Helix 32
32
C
18 37Right-handed alpha
Helix 33
33
C
38 46Right-handed alpha
Helix 34
34
C
50 77Right-handed alpha
Helix 35
35
C
84 101Right-handed alpha
Helix 36
36
C
103 114Right-handed alpha
Helix 37
37
C
118 125Right-handed alpha
Helix 38
38
C
128 131Right-handed 310
Helix 39
39
C
132 145Right-handed alpha
Helix 40
40
C
146 154Right-handed alpha
Helix 41
41
C
156 171Right-handed alpha
Helix 42
42
C
173 178Right-handed alpha
Helix 43
43
C
179 182Right-handed 310
Helix 44
44
C
183 195Right-handed alpha
Helix 45
45
C
200 214Right-handed alpha
Helix 46
46
C
218 246Right-handed alpha
Helix 47
47
D
13 17Right-handed 310
Helix 48
48
D
18 37Right-handed alpha
Helix 49
49
D
38 46Right-handed alpha
Helix 50
50
D
50 77Right-handed alpha
Helix 51
51
D
84 101Right-handed alpha
Helix 52
52
D
103 114Right-handed alpha
Helix 53
53
D
118 125Right-handed alpha
Helix 54
54
D
128 131Right-handed 310
Helix 55
55
D
132 145Right-handed alpha
Helix 56
56
D
146 154Right-handed alpha
Helix 57
57
D
156 171Right-handed alpha
Helix 58
58
D
173 178Right-handed alpha
Helix 59
59
D
180 196Right-handed alpha
Helix 60
60
D
200 214Right-handed alpha
Helix 61
61
D
218 246Right-handed alpha
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There are no sheets in PDB entry 3OQL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il