Analysis of interatomic Contacts of Structural Units in PDB entry:
3OQV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OQV entry

There is 1 chain in PDB entry 3OQV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 28ALA 239
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3OQV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 58Right-handed alpha
Helix 2
2
A
70 79Right-handed alpha
Helix 3
3
A
81 108Right-handed alpha
Helix 4
4
A
110 112Right-handed 310
Helix 5
5
A
119 123Right-handed alpha
Helix 6
6
A
125 142Right-handed alpha
Helix 7
7
A
142 159Right-handed alpha
Helix 8
8
A
168 194Right-handed alpha
Helix 9
9
A
206 213Right-handed alpha
Helix 10
10
A
231 239Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3OQV.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
59 67parallel
Strand 3
A
29 37parallel
Strand 4
A
198 202parallel
Strand 5
A
225 229parallel
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