Analysis of interatomic Contacts of Structural Units in PDB entry:
3ORG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ORG entry

There are 3 chains in PDB entry 3ORG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 88ASN 710
B
 SER 88ASN 710
C
 SER 88PRO 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are101 helices in PDB entry 3ORG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
89 131Right-handed alpha
Helix 2
2
A
132 158Right-handed alpha
Helix 3
3
A
159 163Right-handed 310
Helix 4
4
A
166 174Right-handed alpha
Helix 5
5
A
177 182Right-handed alpha
Helix 6
6
A
183 185Right-handed 310
Helix 7
7
A
186 203Right-handed alpha
Helix 8
8
A
209 225Right-handed alpha
Helix 9
9
A
227 236Right-handed alpha
Helix 10
10
A
236 257Right-handed alpha
Helix 11
11
A
258 270Right-handed alpha
Helix 12
12
A
277 293Right-handed alpha
Helix 13
13
A
320 351Right-handed alpha
Helix 14
14
A
357 372Right-handed alpha
Helix 15
15
A
382 391Right-handed alpha
Helix 16
16
A
407 421Right-handed alpha
Helix 17
17
A
429 453Right-handed alpha
Helix 18
18
A
457 474Right-handed alpha
Helix 19
19
A
478 487Right-handed alpha
Helix 20
20
A
493 511Right-handed alpha
Helix 21
21
A
513 522Right-handed alpha
Helix 22
22
A
539 544Right-handed alpha
Helix 23
23
A
558 569Right-handed alpha
Helix 24
24
A
589 594Right-handed alpha
Helix 25
25
A
671 682Right-handed alpha
Helix 26
26
B
89 131Right-handed alpha
Helix 27
27
B
132 158Right-handed alpha
Helix 28
28
B
159 163Right-handed 310
Helix 29
29
B
166 175Right-handed alpha
Helix 30
30
B
177 182Right-handed alpha
Helix 31
31
B
183 185Right-handed 310
Helix 32
32
B
186 203Right-handed alpha
Helix 33
33
B
209 225Right-handed alpha
Helix 34
34
B
231 236Right-handed alpha
Helix 35
35
B
236 257Right-handed alpha
Helix 36
36
B
258 270Right-handed alpha
Helix 37
37
B
277 293Right-handed alpha
Helix 38
38
B
320 350Right-handed alpha
Helix 39
39
B
357 372Right-handed alpha
Helix 40
40
B
382 391Right-handed alpha
Helix 41
41
B
407 421Right-handed alpha
Helix 42
42
B
429 453Right-handed alpha
Helix 43
43
B
457 475Right-handed alpha
Helix 44
44
B
478 487Right-handed alpha
Helix 45
45
B
493 511Right-handed alpha
Helix 46
46
B
513 522Right-handed alpha
Helix 47
47
B
539 544Right-handed alpha
Helix 48
48
B
558 569Right-handed alpha
Helix 49
49
B
589 594Right-handed alpha
Helix 50
50
B
671 682Right-handed alpha
Helix 51
51
C
89 131Right-handed alpha
Helix 52
52
C
132 158Right-handed alpha
Helix 53
53
C
159 163Right-handed 310
Helix 54
54
C
166 174Right-handed alpha
Helix 55
55
C
177 182Right-handed alpha
Helix 56
56
C
183 185Right-handed 310
Helix 57
57
C
186 203Right-handed alpha
Helix 58
58
C
209 225Right-handed alpha
Helix 59
59
C
227 236Right-handed alpha
Helix 60
60
C
236 257Right-handed alpha
Helix 61
61
C
258 270Right-handed alpha
Helix 62
62
C
277 294Right-handed alpha
Helix 63
63
C
319 351Right-handed alpha
Helix 64
64
C
357 372Right-handed alpha
Helix 65
65
C
382 391Right-handed alpha
Helix 66
66
C
407 421Right-handed alpha
Helix 67
67
C
429 448Right-handed alpha
Helix 68
68
C
448 453Right-handed alpha
Helix 69
69
C
457 475Right-handed alpha
Helix 70
70
C
478 487Right-handed alpha
Helix 71
71
C
493 511Right-handed alpha
Helix 72
72
C
513 522Right-handed alpha
Helix 73
73
C
539 544Right-handed alpha
Helix 74
74
C
558 569Right-handed alpha
Helix 75
75
C
589 598Right-handed alpha
Helix 76
76
C
671 682Right-handed alpha
Helix 77
77
D
89 131Right-handed alpha
Helix 78
78
D
132 158Right-handed alpha
Helix 79
79
D
159 163Right-handed 310
Helix 80
80
D
166 174Right-handed alpha
Helix 81
81
D
177 182Right-handed alpha
Helix 82
82
D
183 185Right-handed 310
Helix 83
83
D
186 203Right-handed alpha
Helix 84
84
D
209 225Right-handed alpha
Helix 85
85
D
227 236Right-handed alpha
Helix 86
86
D
236 257Right-handed alpha
Helix 87
87
D
258 270Right-handed alpha
Helix 88
88
D
277 293Right-handed alpha
Helix 89
89
D
319 351Right-handed alpha
Helix 90
90
D
357 372Right-handed alpha
Helix 91
91
D
382 391Right-handed alpha
Helix 92
92
D
407 421Right-handed alpha
Helix 93
93
D
429 453Right-handed alpha
Helix 94
94
D
457 474Right-handed alpha
Helix 95
95
D
478 487Right-handed alpha
Helix 96
96
D
493 511Right-handed alpha
Helix 97
97
D
513 523Right-handed alpha
Helix 98
98
D
539 544Right-handed alpha
Helix 99
99
D
558 569Right-handed alpha
Helix 100
100
D
589 594Right-handed alpha
Helix 101
101
D
671 682Right-handed alpha
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There are 14 sheets in PDB entry 3ORG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 275first strand
Strand 2
D
273 275anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
526 530first strand
Strand 2
A
705 706anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 575first strand
Strand 2
A
587 588anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
665 667first strand
Strand 2
A
686 691parallel
Strand 3
A
694 700anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 275first strand
Strand 2
C
273 275anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
526 530first strand
Strand 2
B
705 706anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
574 578first strand
Strand 2
B
584 588anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
665 667first strand
Strand 2
B
686 691parallel
Strand 3
B
694 700anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
526 530first strand
Strand 2
C
705 706anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
574 575first strand
Strand 2
C
587 588anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
665 667first strand
Strand 2
C
686 691parallel
Strand 3
C
694 700anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
526 530first strand
Strand 2
D
705 706anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
574 575first strand
Strand 2
D
587 588anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
665 667first strand
Strand 2
D
686 691parallel
Strand 3
D
694 700anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il