Analysis of interatomic Contacts of Structural Units in PDB entry:
3ORZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ORZ entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 8 chains in PDB entry 3ORZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 74SER 231
A
 PHE 242THR 359
B
 GLN 73ASN 240
B
 PHE 242THR 359
C
 PRO 74SER 231
C
 PHE 242THR 359
D
 GLN 73ASN 240
D
 PHE 242THR 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3ORZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
78 80Right-handed 310
Helix 2
2
A
115 121Right-handed alpha
Helix 3
3
A
123 136Right-handed alpha
Helix 4
4
A
166 175Right-handed alpha
Helix 5
5
A
178 199Right-handed alpha
Helix 6
6
A
250 257Right-handed alpha
Helix 7
7
A
260 278Right-handed alpha
Helix 8
8
A
286 297Right-handed alpha
Helix 9
9
A
306 317Right-handed alpha
Helix 10
10
A
320 324Right-handed 310
Helix 11
11
A
327 331Right-handed 310
Helix 12
12
A
332 338Right-handed alpha
Helix 13
13
A
339 343Right-handed 310
Helix 14
14
A
349 353Right-handed 310
Helix 15
15
B
78 80Right-handed 310
Helix 16
16
B
115 121Right-handed alpha
Helix 17
17
B
123 137Right-handed alpha
Helix 18
18
B
166 175Right-handed alpha
Helix 19
19
B
178 199Right-handed alpha
Helix 20
20
B
250 257Right-handed alpha
Helix 21
21
B
260 278Right-handed alpha
Helix 22
22
B
286 296Right-handed alpha
Helix 23
23
B
306 317Right-handed alpha
Helix 24
24
B
320 324Right-handed 310
Helix 25
25
B
327 331Right-handed 310
Helix 26
26
B
332 338Right-handed alpha
Helix 27
27
B
339 343Right-handed 310
Helix 28
28
B
349 353Right-handed 310
Helix 29
29
C
78 80Right-handed 310
Helix 30
30
C
115 121Right-handed alpha
Helix 31
31
C
123 137Right-handed alpha
Helix 32
32
C
166 175Right-handed alpha
Helix 33
33
C
178 199Right-handed alpha
Helix 34
34
C
245 249Right-handed 310
Helix 35
35
C
250 257Right-handed alpha
Helix 36
36
C
260 278Right-handed alpha
Helix 37
37
C
286 297Right-handed alpha
Helix 38
38
C
306 317Right-handed alpha
Helix 39
39
C
320 324Right-handed 310
Helix 40
40
C
327 331Right-handed 310
Helix 41
41
C
332 338Right-handed alpha
Helix 42
42
C
339 343Right-handed 310
Helix 43
43
C
349 353Right-handed 310
Helix 44
44
D
78 80Right-handed 310
Helix 45
45
D
115 121Right-handed alpha
Helix 46
46
D
123 137Right-handed alpha
Helix 47
47
D
166 175Right-handed alpha
Helix 48
48
D
178 199Right-handed alpha
Helix 49
49
D
250 257Right-handed alpha
Helix 50
50
D
260 278Right-handed alpha
Helix 51
51
D
286 296Right-handed alpha
Helix 52
52
D
306 317Right-handed alpha
Helix 53
53
D
327 331Right-handed 310
Helix 54
54
D
332 338Right-handed alpha
Helix 55
55
D
339 343Right-handed 310
Helix 56
56
D
349 353Right-handed 310
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There are 12 sheets in PDB entry 3ORZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 90first strand
Strand 2
A
94 101anti-parallel
Strand 3
A
106 114anti-parallel
Strand 4
A
154 159anti-parallel
Strand 5
A
145 150anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
228 229anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
219 221anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 90first strand
Strand 2
B
94 101anti-parallel
Strand 3
B
106 114anti-parallel
Strand 4
B
154 159anti-parallel
Strand 5
B
145 150anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 202first strand
Strand 2
B
228 229anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 213first strand
Strand 2
B
219 221anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 90first strand
Strand 2
C
94 101anti-parallel
Strand 3
C
106 114anti-parallel
Strand 4
C
154 159anti-parallel
Strand 5
C
145 150anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
201 202first strand
Strand 2
C
228 229anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
211 213first strand
Strand 2
C
219 221anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 90first strand
Strand 2
D
94 101anti-parallel
Strand 3
D
106 114anti-parallel
Strand 4
D
154 159anti-parallel
Strand 5
D
145 150anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
201 202first strand
Strand 2
D
228 229anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
211 213first strand
Strand 2
D
219 221anti-parallel
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