Analysis of interatomic Contacts of Structural Units in PDB entry:
3OSM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OSM entry

There is 1 chain in PDB entry 3OSM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 918ASP 1036
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 5 helices in PDB entry 3OSM. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
920 925Right-handed alpha
Helix 2
2
A
926 928Right-handed 310
Helix 3
3
A
943 957Right-handed alpha
Helix 4
4
A
958 962Right-handed 310
Helix 5
5
A
1014 1033Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3OSM. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
932 933first strand
Strand 2
A
1004 1012anti-parallel
Strand 3
A
938 940anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
932 933first strand
Strand 2
A
1004 1012anti-parallel
Strand 3
A
989 998anti-parallel
Strand 4
A
974 980anti-parallel
Strand 5
A
964 969anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il