Analysis of interatomic Contacts of Structural Units in PDB entry:
3OTQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OTQ entry

There is 1 chain in PDB entry 3OTQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4ASN 548
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 3OTQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 20Right-handed 310
Helix 2
2
A
21 30Right-handed alpha
Helix 3
3
A
36 41Right-handed alpha
Helix 4
4
A
48 55Right-handed alpha
Helix 5
5
A
59 74Right-handed alpha
Helix 6
6
A
87 99Right-handed alpha
Helix 7
7
A
102 115Right-handed alpha
Helix 8
8
A
132 145Right-handed alpha
Helix 9
9
A
153 157Right-handed alpha
Helix 10
10
A
162 173Right-handed alpha
Helix 11
11
A
176 178Right-handed 310
Helix 12
12
A
190 195Right-handed alpha
Helix 13
13
A
205 218Right-handed alpha
Helix 14
14
A
270 275Right-handed 310
Helix 15
15
A
276 285Right-handed alpha
Helix 16
16
A
304 308Right-handed 310
Helix 17
17
A
309 324Right-handed alpha
Helix 18
18
A
335 348Right-handed alpha
Helix 19
19
A
370 377Right-handed alpha
Helix 20
20
A
379 381Right-handed 310
Helix 21
21
A
382 387Right-handed alpha
Helix 22
22
A
391 400Right-handed alpha
Helix 23
23
A
400 409Right-handed alpha
Helix 24
24
A
443 455Right-handed alpha
Helix 25
25
A
459 464Right-handed alpha
Helix 26
26
A
468 478Right-handed alpha
Helix 27
27
A
500 507Right-handed 310
Helix 28
28
A
525 530Right-handed alpha
Helix 29
29
A
530 546Right-handed alpha
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There are 2 sheets in PDB entry 3OTQ. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 152first strand
Strand 2
A
118 123parallel
Strand 3
A
5 8parallel
Strand 4
A
180 184parallel
Strand 5
A
199 202parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 245first strand
Strand 2
A
248 255anti-parallel
Strand 3
A
287 292anti-parallel
Strand 4
A
260 264parallel
Strand 5
A
329 334parallel
Strand 6
A
352 358parallel
Strand 7
A
488 493parallel
Strand 8
A
515 519parallel
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