Analysis of interatomic Contacts of Structural Units in PDB entry:
3OV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OV0 entry

There is 1 chain in PDB entry 3OV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1MET 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3OV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 37Right-handed alpha
Helix 2
2
A
48 54Right-handed alpha
Helix 3
3
A
56 61Right-handed 310
Helix 4
4
A
100 104Right-handed 310
Helix 5
5
A
112 117Right-handed alpha
Helix 6
6
A
128 134Right-handed alpha
Helix 7
7
A
153 158Right-handed alpha
Helix 8
8
A
181 186Right-handed alpha
Helix 9
9
A
189 193Right-handed 310
Helix 10
10
A
208 213Right-handed alpha
Helix 11
11
A
214 215Right-handed 310
Helix 12
12
A
216 221Right-handed 310
Helix 13
13
A
258 263Right-handed alpha
Helix 14
14
A
288 293Right-handed alpha
Helix 15
15
A
294 299Right-handed 310
Helix 16
16
A
311 315Right-handed alpha
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There are 4 sheets in PDB entry 3OV0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
16 18anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
94 99anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 170first strand
Strand 2
A
176 180anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 250first strand
Strand 2
A
253 255anti-parallel
Strand 3
A
316 317anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il