Analysis of interatomic Contacts of Structural Units in PDB entry:
3OVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OVR entry

There are 2 chains in PDB entry 3OVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4ARG 224
B
 GLY 4LYS 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 3OVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 17Right-handed 310
Helix 2
2
A
18 29Right-handed alpha
Helix 3
3
A
50 62Right-handed alpha
Helix 4
4
A
75 78Right-handed 310
Helix 5
5
A
79 87Right-handed alpha
Helix 6
6
A
96 98Right-handed 310
Helix 7
7
A
100 111Right-handed alpha
Helix 8
8
A
124 135Right-handed 310
Helix 9
9
A
153 155Right-handed 310
Helix 10
10
A
156 167Right-handed alpha
Helix 11
11
A
182 190Right-handed alpha
Helix 12
12
A
197 202Right-handed alpha
Helix 13
13
A
205 224Right-handed alpha
Helix 14
14
B
15 17Right-handed 310
Helix 15
15
B
18 29Right-handed alpha
Helix 16
16
B
50 62Right-handed alpha
Helix 17
17
B
75 78Right-handed 310
Helix 18
18
B
79 87Right-handed alpha
Helix 19
19
B
100 111Right-handed alpha
Helix 20
20
B
124 129Right-handed 310
Helix 21
21
B
131 135Right-handed 310
Helix 22
22
B
153 155Right-handed 310
Helix 23
23
B
156 167Right-handed alpha
Helix 24
24
B
182 190Right-handed alpha
Helix 25
25
B
197 202Right-handed alpha
Helix 26
26
B
205 223Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3OVR. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
193 196parallel
Strand 3
A
171 175parallel
Strand 4
A
137 141parallel
Strand 5
A
114 119parallel
Strand 6
A
90 94parallel
Strand 7
A
67 72parallel
Strand 8
A
34 39parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 9first strand
Strand 2
B
193 196parallel
Strand 3
B
171 175parallel
Strand 4
B
137 141parallel
Strand 5
B
114 119parallel
Strand 6
B
90 94parallel
Strand 7
B
67 72parallel
Strand 8
B
34 39parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il