Analysis of interatomic Contacts of Structural Units in PDB entry:
3OW7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OW7 entry

There are 2 chains in PDB entry 3OW7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 90ILE 385
B
THR 89ILE 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3OW7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
156 171Right-handed alpha
Helix 2
2
A
174 189Right-handed alpha
Helix 3
3
A
191 200Right-handed alpha
Helix 4
4
A
252 258Right-handed alpha
Helix 5
5
A
260 262Right-handed 310
Helix 6
6
B
157 171Right-handed alpha
Helix 7
7
B
174 189Right-handed alpha
Helix 8
8
B
191 202Right-handed alpha
Helix 9
9
B
251 256Right-handed alpha
Helix 10
10
B
330 332Right-handed 310
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There are 14 sheets in PDB entry 3OW7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
95 96first strand
Strand 2
A
378 379anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
100 102first strand
Strand 2
A
324 328anti-parallel
Strand 3
A
364 369anti-parallel
Strand 4
A
356 359anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
106 108first strand
Strand 2
A
313 319anti-parallel
Strand 3
A
264 267anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
106 108first strand
Strand 2
A
313 319anti-parallel
Strand 3
A
111 115anti-parallel
Strand 4
A
243 251anti-parallel
Strand 5
A
293 301anti-parallel
Strand 6
A
278 287anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
131 133first strand
Strand 2
A
149 154anti-parallel
Strand 3
A
208 211anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
143 144first strand
Strand 2
A
216 219anti-parallel
Strand 3
A
237 239anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
333 334first strand
Strand 2
A
339 341anti-parallel
Strand 3
A
353 354anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
97 98first strand
Strand 2
B
376 377anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
100 102first strand
Strand 2
B
324 328anti-parallel
Strand 3
B
364 366anti-parallel
Strand 4
B
359 361anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
265 267first strand
Strand 2
B
312 319anti-parallel
Strand 3
B
106 115anti-parallel
Strand 4
B
243 250anti-parallel
Strand 5
B
294 301anti-parallel
Strand 6
B
278 281anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
265 267first strand
Strand 2
B
312 319anti-parallel
Strand 3
B
106 115anti-parallel
Strand 4
B
243 250anti-parallel
Strand 5
B
294 301anti-parallel
Strand 6
B
284 287anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
122 125first strand
Strand 2
B
234 239anti-parallel
Strand 3
B
216 218anti-parallel
Strand 4
B
143 144anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
208 211first strand
Strand 2
B
149 154anti-parallel
Strand 3
B
130 133anti-parallel
Strand 4
B
228 229anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
340 344first strand
Strand 2
B
350 354anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il