Analysis of interatomic Contacts of Structural Units in PDB entry:
3OWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OWV entry

There are 2 chains in PDB entry 3OWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 46GLN 274
B
 LYS 43GLN 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3OWV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 56Right-handed alpha
Helix 2
2
A
59 64Right-handed alpha
Helix 3
3
A
82 84Right-handed 310
Helix 4
4
A
118 122Right-handed 310
Helix 5
5
A
163 168Right-handed alpha
Helix 6
6
A
188 193Right-handed alpha
Helix 7
7
A
200 214Right-handed alpha
Helix 8
8
B
50 56Right-handed alpha
Helix 9
9
B
59 64Right-handed alpha
Helix 10
10
B
82 84Right-handed 310
Helix 11
11
B
118 122Right-handed 310
Helix 12
12
B
163 168Right-handed alpha
Helix 13
13
B
188 193Right-handed alpha
Helix 14
14
B
200 214Right-handed alpha
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There are 8 sheets in PDB entry 3OWV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
78 80anti-parallel
Strand 3
A
249 255anti-parallel
Strand 4
A
236 243anti-parallel
Strand 5
A
218 225anti-parallel
Strand 6
A
107 117anti-parallel
Strand 7
A
96 104anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 160first strand
Strand 2
A
183 187anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
198 199anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 263first strand
Strand 2
A
270 272anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
78 80anti-parallel
Strand 3
B
249 255anti-parallel
Strand 4
B
236 243anti-parallel
Strand 5
B
218 225anti-parallel
Strand 6
B
107 117anti-parallel
Strand 7
B
96 104anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 160first strand
Strand 2
B
183 187anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 195first strand
Strand 2
B
198 199anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 263first strand
Strand 2
B
270 272anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il