Analysis of interatomic Contacts of Structural Units in PDB entry:
3OX4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OX4 entry

There are 4 chains in PDB entry 3OX4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PHE 383
B
 ALA 2PHE 383
C
 ALA 2PHE 383
D
 ALA 2PHE 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 3OX4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 25Right-handed alpha
Helix 2
2
A
40 45Right-handed alpha
Helix 3
3
A
46 57Right-handed alpha
Helix 4
4
A
73 87Right-handed alpha
Helix 5
5
A
97 113Right-handed alpha
Helix 6
6
A
116 121Right-handed 310
Helix 7
7
A
166 169Right-handed 310
Helix 8
8
A
176 180Right-handed 310
Helix 9
9
A
184 205Right-handed alpha
Helix 10
10
A
209 233Right-handed alpha
Helix 11
11
A
236 258Right-handed alpha
Helix 12
12
A
260 273Right-handed alpha
Helix 13
13
A
276 307Right-handed alpha
Helix 14
14
A
315 334Right-handed alpha
Helix 15
15
A
346 348Right-handed 310
Helix 16
16
A
349 358Right-handed alpha
Helix 17
17
A
360 366Right-handed 310
Helix 18
18
A
371 382Right-handed alpha
Helix 19
19
B
17 25Right-handed alpha
Helix 20
20
B
40 45Right-handed alpha
Helix 21
21
B
46 58Right-handed alpha
Helix 22
22
B
73 88Right-handed alpha
Helix 23
23
B
97 114Right-handed alpha
Helix 24
24
B
116 121Right-handed 310
Helix 25
25
B
166 169Right-handed 310
Helix 26
26
B
176 180Right-handed 310
Helix 27
27
B
184 205Right-handed alpha
Helix 28
28
B
209 233Right-handed alpha
Helix 29
29
B
236 258Right-handed alpha
Helix 30
30
B
260 274Right-handed alpha
Helix 31
31
B
276 307Right-handed alpha
Helix 32
32
B
315 334Right-handed alpha
Helix 33
33
B
339 344Right-handed alpha
Helix 34
34
B
346 348Right-handed 310
Helix 35
35
B
349 359Right-handed alpha
Helix 36
36
B
360 366Right-handed 310
Helix 37
37
B
371 382Right-handed alpha
Helix 38
38
C
17 25Right-handed alpha
Helix 39
39
C
39 45Right-handed alpha
Helix 40
40
C
46 57Right-handed alpha
Helix 41
41
C
73 87Right-handed alpha
Helix 42
42
C
97 114Right-handed alpha
Helix 43
43
C
116 121Right-handed 310
Helix 44
44
C
166 169Right-handed 310
Helix 45
45
C
176 180Right-handed 310
Helix 46
46
C
184 205Right-handed alpha
Helix 47
47
C
209 225Right-handed alpha
Helix 48
48
C
226 233Right-handed alpha
Helix 49
49
C
236 258Right-handed alpha
Helix 50
50
C
260 270Right-handed alpha
Helix 51
51
C
276 307Right-handed alpha
Helix 52
52
C
315 334Right-handed alpha
Helix 53
53
C
346 348Right-handed 310
Helix 54
54
C
349 358Right-handed alpha
Helix 55
55
C
362 366Right-handed 310
Helix 56
56
C
371 381Right-handed alpha
Helix 57
57
D
17 25Right-handed alpha
Helix 58
58
D
39 45Right-handed alpha
Helix 59
59
D
46 57Right-handed alpha
Helix 60
60
D
73 87Right-handed alpha
Helix 61
61
D
97 114Right-handed alpha
Helix 62
62
D
117 121Right-handed 310
Helix 63
63
D
166 169Right-handed 310
Helix 64
64
D
177 180Right-handed 310
Helix 65
65
D
184 205Right-handed alpha
Helix 66
66
D
209 233Right-handed alpha
Helix 67
67
D
236 258Right-handed alpha
Helix 68
68
D
260 274Right-handed alpha
Helix 69
69
D
276 307Right-handed alpha
Helix 70
70
D
315 334Right-handed alpha
Helix 71
71
D
339 344Right-handed alpha
Helix 72
72
D
346 348Right-handed 310
Helix 73
73
D
349 358Right-handed alpha
Helix 74
74
D
360 366Right-handed 310
Helix 75
75
D
371 382Right-handed alpha
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There are 8 sheets in PDB entry 3OX4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
B
11 14anti-parallel
Strand 3
B
172 175parallel
Strand 4
B
133 137parallel
Strand 5
B
91 96parallel
Strand 6
B
33 39parallel
Strand 7
B
61 68parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 68first strand
Strand 2
A
33 39parallel
Strand 3
A
91 96parallel
Strand 4
A
133 137parallel
Strand 5
A
172 175parallel
Strand 6
A
11 14parallel
Strand 7
B
4 7anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
159 164parallel
Strand 3
A
149 154anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 123first strand
Strand 2
B
159 164parallel
Strand 3
B
149 154anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 14first strand
Strand 2
C
172 175parallel
Strand 3
C
133 137parallel
Strand 4
C
91 96parallel
Strand 5
C
33 37parallel
Strand 6
C
61 65parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
122 123first strand
Strand 2
C
161 164parallel
Strand 3
C
149 152anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 14first strand
Strand 2
D
172 175parallel
Strand 3
D
133 137parallel
Strand 4
D
91 96parallel
Strand 5
D
33 38parallel
Strand 6
D
61 65parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
122 123first strand
Strand 2
D
160 164parallel
Strand 3
D
149 153anti-parallel
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