Analysis of interatomic Contacts of Structural Units in PDB entry:
3OXH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OXH entry

There is 1 chain in PDB entry 3OXH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -13ALA 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3OXH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 34Right-handed alpha
Helix 2
2
A
85 91Right-handed alpha
Helix 3
3
A
153 166Right-handed alpha
Helix 4
4
A
213 224Right-handed alpha
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There are 2 sheets in PDB entry 3OXH. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
49 54anti-parallel
Strand 3
A
57 64anti-parallel
Strand 4
A
12 19parallel
Strand 5
A
76 82anti-parallel
Strand 6
A
123 129parallel
Strand 7
A
111 117anti-parallel
Strand 8
A
99 107anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
181 185anti-parallel
Strand 3
A
188 194anti-parallel
Strand 4
A
144 150parallel
Strand 5
A
204 210anti-parallel
Strand 6
A
251 257parallel
Strand 7
A
239 245anti-parallel
Strand 8
A
227 235anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il