Analysis of interatomic Contacts of Structural Units in PDB entry:
3OXN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OXN entry

There are 4 chains in PDB entry 3OXN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 111GLU 325
B
 ASP 110ILE 324
C
 PHE 109ARG 323
D
 PRO 111LYS 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 3OXN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
124 130Right-handed alpha
Helix 2
2
A
130 142Right-handed alpha
Helix 3
3
A
153 155Right-handed 310
Helix 4
4
A
156 163Right-handed alpha
Helix 5
5
A
198 203Right-handed 310
Helix 6
6
A
206 212Right-handed alpha
Helix 7
7
A
221 232Right-handed alpha
Helix 8
8
A
247 254Right-handed alpha
Helix 9
9
A
265 275Right-handed alpha
Helix 10
10
A
298 300Right-handed 310
Helix 11
11
A
302 325Right-handed alpha
Helix 12
12
B
123 129Right-handed alpha
Helix 13
13
B
129 142Right-handed alpha
Helix 14
14
B
156 163Right-handed alpha
Helix 15
15
B
198 203Right-handed 310
Helix 16
16
B
206 211Right-handed alpha
Helix 17
17
B
221 232Right-handed alpha
Helix 18
18
B
247 255Right-handed alpha
Helix 19
19
B
265 273Right-handed alpha
Helix 20
20
B
296 300Right-handed 310
Helix 21
21
B
302 324Right-handed alpha
Helix 22
22
C
110 114Right-handed 310
Helix 23
23
C
123 129Right-handed alpha
Helix 24
24
C
129 142Right-handed alpha
Helix 25
25
C
156 163Right-handed alpha
Helix 26
26
C
198 202Right-handed 310
Helix 27
27
C
206 211Right-handed alpha
Helix 28
28
C
221 232Right-handed alpha
Helix 29
29
C
250 255Right-handed alpha
Helix 30
30
C
265 273Right-handed alpha
Helix 31
31
C
296 300Right-handed 310
Helix 32
32
C
302 322Right-handed alpha
Helix 33
33
D
123 129Right-handed alpha
Helix 34
34
D
129 142Right-handed alpha
Helix 35
35
D
153 155Right-handed 310
Helix 36
36
D
156 163Right-handed alpha
Helix 37
37
D
198 202Right-handed 310
Helix 38
38
D
206 213Right-handed alpha
Helix 39
39
D
221 232Right-handed alpha
Helix 40
40
D
246 255Right-handed alpha
Helix 41
41
D
265 276Right-handed alpha
Helix 42
42
D
296 300Right-handed 310
Helix 43
43
D
302 322Right-handed alpha
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There are 4 sheets in PDB entry 3OXN. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 186first strand
Strand 2
A
291 296anti-parallel
Strand 3
A
168 171anti-parallel
Strand 4
A
117 122parallel
Strand 5
A
146 151parallel
Strand 6
D
240 244parallel
Strand 7
D
215 218parallel
Strand 8
D
260 264parallel
Strand 9
D
190 195anti-parallel
Strand 10
D
277 281anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
190 195anti-parallel
Strand 3
A
260 264anti-parallel
Strand 4
A
214 217parallel
Strand 5
A
239 243parallel
Strand 6
D
146 151parallel
Strand 7
D
117 122parallel
Strand 8
D
168 171parallel
Strand 9
D
289 295anti-parallel
Strand 10
D
181 188anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 186first strand
Strand 2
B
291 295anti-parallel
Strand 3
B
168 171anti-parallel
Strand 4
B
117 122parallel
Strand 5
B
146 151parallel
Strand 6
C
240 244parallel
Strand 7
C
215 218parallel
Strand 8
C
260 264parallel
Strand 9
C
190 195anti-parallel
Strand 10
C
277 281anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
277 278first strand
Strand 2
B
190 195anti-parallel
Strand 3
B
260 264anti-parallel
Strand 4
B
215 217parallel
Strand 5
B
242 243parallel
Strand 6
C
146 151parallel
Strand 7
C
117 122parallel
Strand 8
C
168 171parallel
Strand 9
C
289 295anti-parallel
Strand 10
C
181 188anti-parallel
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