Analysis of interatomic Contacts of Structural Units in PDB entry:
3OZI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OZI entry

There are 2 chains in PDB entry 3OZI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 34GLU 203
B
 VAL 34SER 201
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3OZI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 48Right-handed alpha
Helix 2
2
A
50 62Right-handed alpha
Helix 3
3
A
75 79Right-handed 310
Helix 4
4
A
82 90Right-handed alpha
Helix 5
5
A
100 103Right-handed 310
Helix 6
6
A
104 121Right-handed alpha
Helix 7
7
A
134 141Right-handed alpha
Helix 8
8
A
144 153Right-handed alpha
Helix 9
9
A
157 173Right-handed alpha
Helix 10
10
A
184 203Right-handed alpha
Helix 11
11
B
43 48Right-handed alpha
Helix 12
12
B
50 62Right-handed alpha
Helix 13
13
B
75 79Right-handed 310
Helix 14
14
B
82 90Right-handed alpha
Helix 15
15
B
100 103Right-handed 310
Helix 16
16
B
104 121Right-handed alpha
Helix 17
17
B
134 141Right-handed alpha
Helix 18
18
B
144 153Right-handed alpha
Helix 19
19
B
157 173Right-handed alpha
Helix 20
20
B
184 200Right-handed alpha
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There are 4 sheets in PDB entry 3OZI. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 70first strand
Strand 2
A
38 42parallel
Strand 3
A
92 97parallel
Strand 4
A
125 126parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 70first strand
Strand 2
A
38 42parallel
Strand 3
A
92 97parallel
Strand 4
A
129 131parallel
Strand 5
A
177 179parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 70first strand
Strand 2
B
38 42parallel
Strand 3
B
92 97parallel
Strand 4
B
125 126parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 70first strand
Strand 2
B
38 42parallel
Strand 3
B
92 97parallel
Strand 4
B
129 131parallel
Strand 5
B
177 179parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il