Analysis of interatomic Contacts of Structural Units in PDB entry:
3OZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OZU entry

There is 1 chain in PDB entry 3OZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 3OZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 20Right-handed alpha
Helix 2
2
A
20 36Right-handed alpha
Helix 3
3
A
37 42Right-handed 310
Helix 4
4
A
49 67Right-handed alpha
Helix 5
5
A
70 89Right-handed alpha
Helix 6
6
A
91 93Right-handed 310
Helix 7
7
A
94 111Right-handed alpha
Helix 8
8
A
112 114Right-handed 310
Helix 9
9
A
115 147Right-handed alpha
Helix 10
10
A
234 244Right-handed alpha
Helix 11
11
A
277 289Right-handed alpha
Helix 12
12
A
308 321Right-handed alpha
Helix 13
13
A
350 353Right-handed 310
Helix 14
14
A
354 359Right-handed alpha
Helix 15
15
A
370 383Right-handed alpha
Helix 16
16
A
387 389Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 3OZU. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 209first strand
Strand 2
A
190 197anti-parallel
Strand 3
A
249 252anti-parallel
Strand 4
A
155 164anti-parallel
Strand 5
A
169 176anti-parallel
Strand 6
A
219 224anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 346first strand
Strand 2
A
324 330parallel
Strand 3
A
296 302parallel
Strand 4
A
269 273parallel
Strand 5
A
364 368parallel
Strand 6
A
391 393parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il