Analysis of interatomic Contacts of Structural Units in PDB entry:
3OZX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OZX entry

There are 2 chains in PDB entry 3OZX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 76THR 599
B
GLU 76GLN 600
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 3OZX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
111 120Right-handed alpha
Helix 2
2
A
135 144Right-handed alpha
Helix 3
3
A
148 157Right-handed alpha
Helix 4
4
A
170 174Right-handed 310
Helix 5
5
A
179 188Right-handed alpha
Helix 6
6
A
192 200Right-handed alpha
Helix 7
7
A
202 206Right-handed 310
Helix 8
8
A
209 213Right-handed 310
Helix 9
9
A
214 229Right-handed alpha
Helix 10
10
A
244 259Right-handed alpha
Helix 11
11
A
270 278Right-handed alpha
Helix 12
12
A
300 310Right-handed alpha
Helix 13
13
A
380 389Right-handed alpha
Helix 14
14
A
420 429Right-handed alpha
Helix 15
15
A
437 443Right-handed alpha
Helix 16
16
A
448 452Right-handed 310
Helix 17
17
A
456 460Right-handed 310
Helix 18
18
A
461 476Right-handed alpha
Helix 19
19
A
491 509Right-handed alpha
Helix 20
20
A
519 527Right-handed alpha
Helix 21
21
A
549 561Right-handed alpha
Helix 22
22
A
580 590Right-handed alpha
Helix 23
23
B
111 120Right-handed alpha
Helix 24
24
B
135 143Right-handed alpha
Helix 25
25
B
148 157Right-handed alpha
Helix 26
26
B
168 174Right-handed alpha
Helix 27
27
B
179 188Right-handed alpha
Helix 28
28
B
192 200Right-handed alpha
Helix 29
29
B
202 206Right-handed 310
Helix 30
30
B
209 213Right-handed 310
Helix 31
31
B
214 229Right-handed alpha
Helix 32
32
B
244 259Right-handed alpha
Helix 33
33
B
270 278Right-handed alpha
Helix 34
34
B
300 310Right-handed alpha
Helix 35
35
B
313 316Right-handed 310
Helix 36
36
B
380 389Right-handed alpha
Helix 37
37
B
420 429Right-handed alpha
Helix 38
38
B
437 443Right-handed alpha
Helix 39
39
B
448 452Right-handed 310
Helix 40
40
B
456 460Right-handed 310
Helix 41
41
B
461 476Right-handed alpha
Helix 42
42
B
491 510Right-handed alpha
Helix 43
43
B
519 527Right-handed alpha
Helix 44
44
B
548 561Right-handed alpha
Helix 45
45
B
580 590Right-handed alpha
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There are 13 sheets in PDB entry 3OZX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
79 82first strand
Strand 2
A
89 91anti-parallel
Strand 3
A
291 294parallel
Strand 4
A
280 287anti-parallel
Strand 5
A
100 105parallel
Strand 6
A
263 267parallel
Strand 7
A
233 237parallel
Strand 8
A
162 165parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
79 82first strand
Strand 2
A
89 91anti-parallel
Strand 3
A
291 294parallel
Strand 4
A
280 287anti-parallel
Strand 5
A
298 299anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
311 312first strand
Strand 2
A
317 318anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
363 366first strand
Strand 2
A
342 346anti-parallel
Strand 3
A
399 400anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
349 353first strand
Strand 2
A
356 360anti-parallel
Strand 3
A
540 543parallel
Strand 4
A
529 536anti-parallel
Strand 5
A
370 374parallel
Strand 6
A
512 516parallel
Strand 7
A
480 484parallel
Strand 8
A
406 409parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
349 353first strand
Strand 2
A
356 360anti-parallel
Strand 3
A
540 543parallel
Strand 4
A
529 536anti-parallel
Strand 5
A
547 548anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
573 576first strand
Strand 2
A
563 566anti-parallel
Strand 3
A
593 597parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
79 82first strand
Strand 2
B
89 91anti-parallel
Strand 3
B
291 294parallel
Strand 4
B
280 287anti-parallel
Strand 5
B
100 105parallel
Strand 6
B
263 267parallel
Strand 7
B
233 237parallel
Strand 8
B
162 165parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
79 82first strand
Strand 2
B
89 91anti-parallel
Strand 3
B
291 294parallel
Strand 4
B
280 287anti-parallel
Strand 5
B
298 299anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
311 312first strand
Strand 2
B
317 318anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
363 366first strand
Strand 2
B
342 346anti-parallel
Strand 3
B
399 400anti-parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
349 353first strand
Strand 2
B
356 360anti-parallel
Strand 3
B
540 543parallel
Strand 4
B
529 536anti-parallel
Strand 5
B
370 374parallel
Strand 6
B
512 516parallel
Strand 7
B
480 484parallel
Strand 8
B
406 409parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
573 575first strand
Strand 2
B
564 566anti-parallel
Strand 3
B
593 597parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il