Analysis of interatomic Contacts of Structural Units in PDB entry:
3OZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OZY entry

There are 2 chains in PDB entry 3OZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2MET 387
B
 SER 2MET 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 32 helices in PDB entry 3OZY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 22Right-handed 310
Helix 2
2
A
57 68Right-handed alpha
Helix 3
3
A
69 74Right-handed alpha
Helix 4
4
A
80 92Right-handed alpha
Helix 5
5
A
92 98Right-handed alpha
Helix 6
6
A
101 123Right-handed alpha
Helix 7
7
A
125 130Right-handed alpha
Helix 8
8
A
151 165Right-handed alpha
Helix 9
9
A
177 193Right-handed alpha
Helix 10
10
A
207 221Right-handed alpha
Helix 11
11
A
234 243Right-handed alpha
Helix 12
12
A
257 268Right-handed alpha
Helix 13
13
A
283 297Right-handed alpha
Helix 14
14
A
308 322Right-handed alpha
Helix 15
15
A
335 339Right-handed 310
Helix 16
16
A
366 373Right-handed alpha
Helix 17
17
B
18 22Right-handed 310
Helix 18
18
B
57 68Right-handed alpha
Helix 19
19
B
69 74Right-handed alpha
Helix 20
20
B
80 92Right-handed alpha
Helix 21
21
B
92 98Right-handed alpha
Helix 22
22
B
101 123Right-handed alpha
Helix 23
23
B
125 130Right-handed alpha
Helix 24
24
B
151 165Right-handed alpha
Helix 25
25
B
177 193Right-handed alpha
Helix 26
26
B
207 221Right-handed alpha
Helix 27
27
B
234 243Right-handed alpha
Helix 28
28
B
257 268Right-handed alpha
Helix 29
29
B
283 297Right-handed alpha
Helix 30
30
B
308 322Right-handed alpha
Helix 31
31
B
335 340Right-handed alpha
Helix 32
32
B
366 373Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 3OZY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 16first strand
Strand 2
A
32 42anti-parallel
Strand 3
A
48 50anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
28 29anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
273 274parallel
Strand 3
A
249 252parallel
Strand 4
A
225 227parallel
Strand 5
A
197 201parallel
Strand 6
A
169 173parallel
Strand 7
A
139 146parallel
Strand 8
A
328 331parallel
Back to list of sheets
Back to top of page

There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
273 274parallel
Strand 3
A
249 252parallel
Strand 4
A
225 227parallel
Strand 5
A
197 201parallel
Strand 6
A
169 173parallel
Strand 7
A
139 146parallel
Strand 8
A
352 353anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 16first strand
Strand 2
B
32 42anti-parallel
Strand 3
B
48 50anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
28 29anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 301first strand
Strand 2
B
273 274parallel
Strand 3
B
249 252parallel
Strand 4
B
225 227parallel
Strand 5
B
197 201parallel
Strand 6
B
169 173parallel
Strand 7
B
139 146parallel
Strand 8
B
328 331parallel
Back to list of sheets
Back to top of page

There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 301first strand
Strand 2
B
273 274parallel
Strand 3
B
249 252parallel
Strand 4
B
225 227parallel
Strand 5
B
197 201parallel
Strand 6
B
169 173parallel
Strand 7
B
139 146parallel
Strand 8
B
352 353anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il