Analysis of interatomic Contacts of Structural Units in PDB entry:
3P02


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P02 entry

There is 1 chain in PDB entry 3P02 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 25TRP 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3P02. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 31Right-handed alpha
Helix 2
2
A
85 96Right-handed alpha
Helix 3
3
A
98 102Right-handed 310
Helix 4
4
A
107 109Right-handed 310
Helix 5
5
A
154 159Right-handed 310
Helix 6
6
A
227 230Right-handed 310
Helix 7
7
A
257 261Right-handed 310
Helix 8
8
A
327 331Right-handed 310
Helix 9
9
A
332 336Right-handed 310
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There are 5 sheets in PDB entry 3P02. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 36first strand
Strand 2
A
57 66anti-parallel
Strand 3
A
125 133anti-parallel
Strand 4
A
111 112anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 51first strand
Strand 2
A
167 175parallel
Strand 3
A
143 151anti-parallel
Strand 4
A
104 105parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 51first strand
Strand 2
A
167 175parallel
Strand 3
A
143 151anti-parallel
Strand 4
A
76 82anti-parallel
Strand 5
A
116 119anti-parallel
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There are 11 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 199first strand
Strand 2
A
187 191anti-parallel
Strand 3
A
308 323anti-parallel
Strand 4
A
180 183anti-parallel
Strand 5
A
203 208anti-parallel
Strand 6
A
213 217anti-parallel
Strand 7
A
232 241anti-parallel
Strand 8
A
249 255anti-parallel
Strand 9
A
269 276anti-parallel
Strand 10
A
283 299anti-parallel
Strand 11
A
263 264anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 199first strand
Strand 2
A
187 191anti-parallel
Strand 3
A
308 323anti-parallel
Strand 4
A
283 299anti-parallel
Strand 5
A
263 264anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il