Analysis of interatomic Contacts of Structural Units in PDB entry:
3P0E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P0E entry

There are 6 chains in PDB entry 3P0E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 24GLY 314
B
 PHE 24GLY 314
C
 PHE 24GLY 314
D
 PHE 24GLY 314
E
 PHE 24GLY 314
F
 PHE 24GLY 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 3P0E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 35Right-handed 310
Helix 2
2
A
51 57Right-handed alpha
Helix 3
3
A
67 82Right-handed alpha
Helix 4
4
A
117 135Right-handed alpha
Helix 5
5
A
189 202Right-handed alpha
Helix 6
6
A
220 224Right-handed 310
Helix 7
7
A
234 248Right-handed alpha
Helix 8
8
A
256 267Right-handed alpha
Helix 9
9
A
290 299Right-handed alpha
Helix 10
10
A
299 314Right-handed alpha
Helix 11
11
B
31 35Right-handed 310
Helix 12
12
B
51 57Right-handed alpha
Helix 13
13
B
67 82Right-handed alpha
Helix 14
14
B
117 135Right-handed alpha
Helix 15
15
B
189 201Right-handed alpha
Helix 16
16
B
220 224Right-handed 310
Helix 17
17
B
234 248Right-handed alpha
Helix 18
18
B
256 267Right-handed alpha
Helix 19
19
B
290 314Right-handed alpha
Helix 20
20
C
31 35Right-handed 310
Helix 21
21
C
51 57Right-handed alpha
Helix 22
22
C
67 83Right-handed alpha
Helix 23
23
C
87 91Right-handed 310
Helix 24
24
C
117 135Right-handed alpha
Helix 25
25
C
189 202Right-handed alpha
Helix 26
26
C
220 224Right-handed 310
Helix 27
27
C
234 248Right-handed alpha
Helix 28
28
C
256 267Right-handed alpha
Helix 29
29
C
290 314Right-handed alpha
Helix 30
30
D
31 35Right-handed 310
Helix 31
31
D
51 57Right-handed alpha
Helix 32
32
D
67 82Right-handed alpha
Helix 33
33
D
117 136Right-handed alpha
Helix 34
34
D
189 201Right-handed alpha
Helix 35
35
D
220 224Right-handed 310
Helix 36
36
D
234 248Right-handed alpha
Helix 37
37
D
256 267Right-handed alpha
Helix 38
38
D
290 299Right-handed alpha
Helix 39
39
D
299 314Right-handed alpha
Helix 40
40
E
41 44Right-handed 310
Helix 41
41
E
51 57Right-handed alpha
Helix 42
42
E
67 82Right-handed alpha
Helix 43
43
E
86 91Right-handed alpha
Helix 44
44
E
117 135Right-handed alpha
Helix 45
45
E
189 201Right-handed alpha
Helix 46
46
E
220 224Right-handed 310
Helix 47
47
E
234 248Right-handed alpha
Helix 48
48
E
256 267Right-handed alpha
Helix 49
49
E
290 299Right-handed alpha
Helix 50
50
E
299 314Right-handed alpha
Helix 51
51
F
31 35Right-handed 310
Helix 52
52
F
51 57Right-handed alpha
Helix 53
53
F
67 82Right-handed alpha
Helix 54
54
F
117 135Right-handed alpha
Helix 55
55
F
189 201Right-handed alpha
Helix 56
56
F
220 224Right-handed 310
Helix 57
57
F
234 248Right-handed alpha
Helix 58
58
F
256 267Right-handed alpha
Helix 59
59
F
290 299Right-handed alpha
Helix 60
60
F
299 313Right-handed alpha
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There are 18 sheets in PDB entry 3P0E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
45 46anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 106first strand
Strand 2
A
109 113anti-parallel
Strand 3
A
61 65parallel
Strand 4
A
141 150parallel
Strand 5
A
270 280parallel
Strand 6
A
158 165anti-parallel
Strand 7
A
208 215parallel
Strand 8
A
250 254parallel
Strand 9
A
141 150anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 176first strand
Strand 2
A
181 184anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 40first strand
Strand 2
B
45 46anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 106first strand
Strand 2
B
109 113anti-parallel
Strand 3
B
61 65parallel
Strand 4
B
141 150parallel
Strand 5
B
270 280parallel
Strand 6
B
158 165anti-parallel
Strand 7
B
208 215parallel
Strand 8
B
250 254parallel
Strand 9
B
141 150anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 177first strand
Strand 2
B
180 184anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 40first strand
Strand 2
C
45 46anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 106first strand
Strand 2
C
109 113anti-parallel
Strand 3
C
61 65parallel
Strand 4
C
141 150parallel
Strand 5
C
270 280parallel
Strand 6
C
158 165anti-parallel
Strand 7
C
208 215parallel
Strand 8
C
250 254parallel
Strand 9
C
141 150anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
172 177first strand
Strand 2
C
180 185anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 40first strand
Strand 2
D
45 46anti-parallel
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There are 9 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 106first strand
Strand 2
D
109 113anti-parallel
Strand 3
D
61 65parallel
Strand 4
D
141 150parallel
Strand 5
D
270 280parallel
Strand 6
D
158 165anti-parallel
Strand 7
D
208 215parallel
Strand 8
D
250 254parallel
Strand 9
D
141 150anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
172 177first strand
Strand 2
D
180 185anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
39 40first strand
Strand 2
E
45 46anti-parallel
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There are 9 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
103 106first strand
Strand 2
E
109 113anti-parallel
Strand 3
E
61 65parallel
Strand 4
E
141 150parallel
Strand 5
E
270 280parallel
Strand 6
E
158 165anti-parallel
Strand 7
E
208 215parallel
Strand 8
E
250 254parallel
Strand 9
E
141 150anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
173 177first strand
Strand 2
E
180 184anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
39 40first strand
Strand 2
F
45 46anti-parallel
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There are 9 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
103 106first strand
Strand 2
F
109 113anti-parallel
Strand 3
F
61 65parallel
Strand 4
F
141 150parallel
Strand 5
F
270 280parallel
Strand 6
F
158 165anti-parallel
Strand 7
F
208 215parallel
Strand 8
F
250 254parallel
Strand 9
F
141 150anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
172 177first strand
Strand 2
F
180 185anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il