Analysis of interatomic Contacts of Structural Units in PDB entry:
3P0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P0G entry

There are 2 chains in PDB entry 3P0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 23ARG 344
B
 VAL 2HIS 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3P0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 61Right-handed alpha
Helix 2
2
A
62 65Right-handed 310
Helix 3
3
A
66 81Right-handed alpha
Helix 4
4
A
81 86Right-handed alpha
Helix 5
5
A
86 96Right-handed alpha
Helix 6
6
A
101 137Right-handed alpha
Helix 7
7
A
137 145Right-handed alpha
Helix 8
8
A
146 171Right-handed alpha
Helix 9
9
A
178 187Right-handed alpha
Helix 10
10
A
196 208Right-handed alpha
Helix 11
11
A
208 227Right-handed alpha
Helix 12
12
A
266 299Right-handed alpha
Helix 13
13
A
304 327Right-handed alpha
Helix 14
14
A
329 340Right-handed alpha
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There are 4 sheets in PDB entry 3P0G. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
16 25anti-parallel
Strand 3
B
77 85anti-parallel
Strand 4
B
68 72anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
118 119parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
45 52anti-parallel
Strand 3
B
32 39anti-parallel
Strand 4
B
91 99anti-parallel
Strand 5
B
107 110anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
45 52anti-parallel
Strand 3
B
32 39anti-parallel
Strand 4
B
91 99anti-parallel
Strand 5
B
114 116anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il