Analysis of interatomic Contacts of Structural Units in PDB entry:
3P0J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P0J entry

There are 4 chains in PDB entry 3P0J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1LYS 680
B
 HIS -1ALA 679
C
 HIS -1LYS 680
D
 HIS -1LYS 681
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are124 helices in PDB entry 3P0J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 13Right-handed alpha
Helix 2
2
A
19 30Right-handed alpha
Helix 3
3
A
46 63Right-handed alpha
Helix 4
4
A
73 80Right-handed 310
Helix 5
5
A
84 103Right-handed alpha
Helix 6
6
A
106 108Right-handed 310
Helix 7
7
A
115 120Right-handed alpha
Helix 8
8
A
122 136Right-handed alpha
Helix 9
9
A
138 144Right-handed alpha
Helix 10
10
A
162 174Right-handed alpha
Helix 11
11
A
182 184Right-handed 310
Helix 12
12
A
185 199Right-handed alpha
Helix 13
13
A
227 231Right-handed 310
Helix 14
14
A
237 247Right-handed alpha
Helix 15
15
A
273 282Right-handed alpha
Helix 16
16
A
300 311Right-handed alpha
Helix 17
17
A
314 340Right-handed alpha
Helix 18
18
A
340 353Right-handed alpha
Helix 19
19
A
387 405Right-handed alpha
Helix 20
20
A
417 422Right-handed alpha
Helix 21
21
A
428 447Right-handed alpha
Helix 22
22
A
457 464Right-handed alpha
Helix 23
23
A
464 477Right-handed alpha
Helix 24
24
A
480 488Right-handed alpha
Helix 25
25
A
494 511Right-handed alpha
Helix 26
26
A
526 533Right-handed alpha
Helix 27
27
A
571 582Right-handed alpha
Helix 28
28
A
591 605Right-handed alpha
Helix 29
29
A
623 633Right-handed alpha
Helix 30
30
A
637 662Right-handed alpha
Helix 31
31
A
664 680Right-handed alpha
Helix 32
32
B
2 13Right-handed alpha
Helix 33
33
B
19 30Right-handed alpha
Helix 34
34
B
46 64Right-handed alpha
Helix 35
35
B
72 79Right-handed alpha
Helix 36
36
B
85 103Right-handed alpha
Helix 37
37
B
106 108Right-handed 310
Helix 38
38
B
115 122Right-handed alpha
Helix 39
39
B
122 137Right-handed alpha
Helix 40
40
B
138 144Right-handed alpha
Helix 41
41
B
145 150Right-handed 310
Helix 42
42
B
162 174Right-handed alpha
Helix 43
43
B
182 184Right-handed 310
Helix 44
44
B
185 199Right-handed alpha
Helix 45
45
B
227 231Right-handed 310
Helix 46
46
B
237 247Right-handed alpha
Helix 47
47
B
273 283Right-handed alpha
Helix 48
48
B
300 310Right-handed alpha
Helix 49
49
B
314 340Right-handed alpha
Helix 50
50
B
340 353Right-handed alpha
Helix 51
51
B
387 405Right-handed alpha
Helix 52
52
B
417 422Right-handed alpha
Helix 53
53
B
428 447Right-handed alpha
Helix 54
54
B
457 464Right-handed alpha
Helix 55
55
B
464 477Right-handed alpha
Helix 56
56
B
480 488Right-handed alpha
Helix 57
57
B
494 512Right-handed alpha
Helix 58
58
B
522 525Right-handed 310
Helix 59
59
B
526 534Right-handed alpha
Helix 60
60
B
638 654Right-handed alpha
Helix 61
61
B
666 679Right-handed alpha
Helix 62
62
C
2 12Right-handed alpha
Helix 63
63
C
19 30Right-handed alpha
Helix 64
64
C
46 63Right-handed alpha
Helix 65
65
C
73 79Right-handed 310
Helix 66
66
C
84 104Right-handed alpha
Helix 67
67
C
115 122Right-handed alpha
Helix 68
68
C
122 136Right-handed alpha
Helix 69
69
C
138 144Right-handed alpha
Helix 70
70
C
161 174Right-handed alpha
Helix 71
71
C
182 184Right-handed 310
Helix 72
72
C
185 199Right-handed alpha
Helix 73
73
C
237 247Right-handed alpha
Helix 74
74
C
273 283Right-handed alpha
Helix 75
75
C
300 310Right-handed alpha
Helix 76
76
C
314 338Right-handed alpha
Helix 77
77
C
340 353Right-handed alpha
Helix 78
78
C
387 405Right-handed alpha
Helix 79
79
C
417 422Right-handed alpha
Helix 80
80
C
428 446Right-handed alpha
Helix 81
81
C
457 464Right-handed alpha
Helix 82
82
C
464 477Right-handed alpha
Helix 83
83
C
480 488Right-handed alpha
Helix 84
84
C
494 512Right-handed alpha
Helix 85
85
C
522 525Right-handed 310
Helix 86
86
C
526 533Right-handed alpha
Helix 87
87
C
571 582Right-handed alpha
Helix 88
88
C
591 605Right-handed alpha
Helix 89
89
C
623 633Right-handed alpha
Helix 90
90
C
637 653Right-handed alpha
Helix 91
91
C
653 662Right-handed alpha
Helix 92
92
C
664 680Right-handed alpha
Helix 93
93
D
2 13Right-handed alpha
Helix 94
94
D
19 30Right-handed alpha
Helix 95
95
D
46 64Right-handed alpha
Helix 96
96
D
72 80Right-handed alpha
Helix 97
97
D
85 104Right-handed alpha
Helix 98
98
D
106 108Right-handed 310
Helix 99
99
D
115 121Right-handed alpha
Helix 100
100
D
122 136Right-handed alpha
Helix 101
101
D
138 144Right-handed alpha
Helix 102
102
D
145 150Right-handed alpha
Helix 103
103
D
161 174Right-handed alpha
Helix 104
104
D
182 184Right-handed 310
Helix 105
105
D
185 200Right-handed alpha
Helix 106
106
D
227 231Right-handed 310
Helix 107
107
D
237 247Right-handed alpha
Helix 108
108
D
273 283Right-handed alpha
Helix 109
109
D
300 311Right-handed alpha
Helix 110
110
D
314 340Right-handed alpha
Helix 111
111
D
340 354Right-handed alpha
Helix 112
112
D
387 405Right-handed alpha
Helix 113
113
D
417 423Right-handed alpha
Helix 114
114
D
428 446Right-handed alpha
Helix 115
115
D
457 464Right-handed alpha
Helix 116
116
D
464 478Right-handed alpha
Helix 117
117
D
480 488Right-handed alpha
Helix 118
118
D
495 512Right-handed alpha
Helix 119
119
D
526 533Right-handed alpha
Helix 120
120
D
571 582Right-handed alpha
Helix 121
121
D
591 605Right-handed alpha
Helix 122
122
D
623 633Right-handed alpha
Helix 123
123
D
637 662Right-handed alpha
Helix 124
124
D
664 681Right-handed alpha
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There are 16 sheets in PDB entry 3P0J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
206 209anti-parallel
Strand 3
A
178 179parallel
Strand 4
A
33 39parallel
Strand 5
A
65 71parallel
Strand 6
A
110 114parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 293first strand
Strand 2
A
296 298anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 456first strand
Strand 2
A
409 414parallel
Strand 3
A
375 379parallel
Strand 4
A
515 518parallel
Strand 5
A
538 541parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
607 609first strand
Strand 2
A
619 621anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 114first strand
Strand 2
B
65 71parallel
Strand 3
B
33 39parallel
Strand 4
B
178 179parallel
Strand 5
B
206 207parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
291 293first strand
Strand 2
B
296 298anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 379first strand
Strand 2
B
411 414parallel
Strand 3
B
453 456parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
515 518first strand
Strand 2
B
538 541parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 17first strand
Strand 2
C
206 209anti-parallel
Strand 3
C
178 179parallel
Strand 4
C
33 39parallel
Strand 5
C
65 71parallel
Strand 6
C
110 114parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
291 293first strand
Strand 2
C
296 298anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
453 456first strand
Strand 2
C
409 414parallel
Strand 3
C
375 379parallel
Strand 4
C
515 518parallel
Strand 5
C
538 541parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
607 608first strand
Strand 2
C
620 621anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
110 114first strand
Strand 2
D
65 71parallel
Strand 3
D
33 39parallel
Strand 4
D
178 179parallel
Strand 5
D
206 207parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
291 292first strand
Strand 2
D
297 298anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
453 456first strand
Strand 2
D
411 414parallel
Strand 3
D
376 379parallel
Strand 4
D
515 518parallel
Strand 5
D
538 541parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
607 609first strand
Strand 2
D
619 621anti-parallel
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