Analysis of interatomic Contacts of Structural Units in PDB entry:
3P0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P0L entry

There are 4 chains in PDB entry 3P0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 64GLU 276
B
 SER 64GLU 276
C
 SER 64GLU 276
D
 SER 64ARG 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3P0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
69 92Right-handed alpha
Helix 2
2
A
129 138Right-handed alpha
Helix 3
3
A
140 144Right-handed 310
Helix 4
4
A
252 275Right-handed alpha
Helix 5
5
B
69 92Right-handed alpha
Helix 6
6
B
129 138Right-handed alpha
Helix 7
7
B
140 144Right-handed 310
Helix 8
8
B
252 275Right-handed alpha
Helix 9
9
C
69 92Right-handed alpha
Helix 10
10
C
129 138Right-handed alpha
Helix 11
11
C
140 144Right-handed 310
Helix 12
12
C
252 275Right-handed alpha
Helix 13
13
D
69 92Right-handed alpha
Helix 14
14
D
129 138Right-handed alpha
Helix 15
15
D
140 144Right-handed 310
Helix 16
16
D
262 274Right-handed alpha
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There are 12 sheets in PDB entry 3P0L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 101first strand
Strand 2
A
107 112anti-parallel
Strand 3
A
118 126anti-parallel
Strand 4
A
233 243anti-parallel
Strand 5
A
224 230anti-parallel
Strand 6
A
197 199anti-parallel
Strand 7
A
182 192anti-parallel
Strand 8
A
202 203anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 159first strand
Strand 2
A
164 171anti-parallel
Strand 3
A
182 192anti-parallel
Strand 4
A
216 217parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 220first strand
Strand 2
A
245 246anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 101first strand
Strand 2
B
107 112anti-parallel
Strand 3
B
118 126anti-parallel
Strand 4
B
233 243anti-parallel
Strand 5
B
224 230anti-parallel
Strand 6
B
197 199anti-parallel
Strand 7
B
182 192anti-parallel
Strand 8
B
202 203anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 159first strand
Strand 2
B
164 171anti-parallel
Strand 3
B
182 192anti-parallel
Strand 4
B
216 217parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 220first strand
Strand 2
B
245 246anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 101first strand
Strand 2
C
107 112anti-parallel
Strand 3
C
118 126anti-parallel
Strand 4
C
233 243anti-parallel
Strand 5
C
224 230anti-parallel
Strand 6
C
197 199anti-parallel
Strand 7
C
182 192anti-parallel
Strand 8
C
164 171anti-parallel
Strand 9
C
153 159anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 101first strand
Strand 2
C
107 112anti-parallel
Strand 3
C
118 126anti-parallel
Strand 4
C
233 243anti-parallel
Strand 5
C
224 230anti-parallel
Strand 6
C
197 199anti-parallel
Strand 7
C
182 192anti-parallel
Strand 8
C
202 203anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
219 220first strand
Strand 2
C
245 246anti-parallel
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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
97 100first strand
Strand 2
D
108 112anti-parallel
Strand 3
D
118 126anti-parallel
Strand 4
D
233 243anti-parallel
Strand 5
D
224 230anti-parallel
Strand 6
D
197 199anti-parallel
Strand 7
D
183 192anti-parallel
Strand 8
D
164 170anti-parallel
Strand 9
D
153 159anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
97 100first strand
Strand 2
D
108 112anti-parallel
Strand 3
D
118 126anti-parallel
Strand 4
D
233 243anti-parallel
Strand 5
D
224 230anti-parallel
Strand 6
D
197 199anti-parallel
Strand 7
D
183 192anti-parallel
Strand 8
D
202 203anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
219 220first strand
Strand 2
D
245 246anti-parallel
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