Analysis of interatomic Contacts of Structural Units in PDB entry:
3P14


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P14 entry

There are 4 chains in PDB entry 3P14 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4ARG 417
B
 MET 3ARG 417
C
 MET 3ARG 417
D
 MET 3LEU 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 3P14. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 16Right-handed alpha
Helix 2
2
A
20 31Right-handed alpha
Helix 3
3
A
38 40Right-handed 310
Helix 4
4
A
69 82Right-handed alpha
Helix 5
5
A
95 97Right-handed 310
Helix 6
6
A
105 109Right-handed 310
Helix 7
7
A
110 113Right-handed 310
Helix 8
8
A
114 125Right-handed alpha
Helix 9
9
A
137 141Right-handed 310
Helix 10
10
A
150 176Right-handed alpha
Helix 11
11
A
196 211Right-handed alpha
Helix 12
12
A
240 251Right-handed alpha
Helix 13
13
A
267 270Right-handed 310
Helix 14
14
A
271 276Right-handed alpha
Helix 15
15
A
301 314Right-handed alpha
Helix 16
16
A
332 353Right-handed alpha
Helix 17
17
A
355 365Right-handed alpha
Helix 18
18
A
367 378Right-handed alpha
Helix 19
19
A
379 381Right-handed 310
Helix 20
20
A
382 394Right-handed alpha
Helix 21
21
A
401 413Right-handed alpha
Helix 22
22
B
3 16Right-handed alpha
Helix 23
23
B
20 29Right-handed alpha
Helix 24
24
B
38 42Right-handed 310
Helix 25
25
B
69 82Right-handed alpha
Helix 26
26
B
95 97Right-handed 310
Helix 27
27
B
105 109Right-handed 310
Helix 28
28
B
110 113Right-handed 310
Helix 29
29
B
114 125Right-handed alpha
Helix 30
30
B
137 141Right-handed 310
Helix 31
31
B
150 176Right-handed alpha
Helix 32
32
B
196 213Right-handed alpha
Helix 33
33
B
240 251Right-handed alpha
Helix 34
34
B
268 277Right-handed alpha
Helix 35
35
B
301 314Right-handed alpha
Helix 36
36
B
332 353Right-handed alpha
Helix 37
37
B
355 366Right-handed alpha
Helix 38
38
B
367 379Right-handed alpha
Helix 39
39
B
382 394Right-handed alpha
Helix 40
40
B
398 400Right-handed 310
Helix 41
41
B
401 413Right-handed alpha
Helix 42
42
C
4 16Right-handed alpha
Helix 43
43
C
20 29Right-handed alpha
Helix 44
44
C
38 40Right-handed 310
Helix 45
45
C
69 82Right-handed alpha
Helix 46
46
C
95 97Right-handed 310
Helix 47
47
C
105 109Right-handed 310
Helix 48
48
C
110 113Right-handed 310
Helix 49
49
C
114 125Right-handed alpha
Helix 50
50
C
137 141Right-handed 310
Helix 51
51
C
150 176Right-handed alpha
Helix 52
52
C
196 211Right-handed alpha
Helix 53
53
C
240 251Right-handed alpha
Helix 54
54
C
268 279Right-handed alpha
Helix 55
55
C
301 314Right-handed alpha
Helix 56
56
C
332 353Right-handed alpha
Helix 57
57
C
355 365Right-handed alpha
Helix 58
58
C
367 379Right-handed alpha
Helix 59
59
C
382 394Right-handed alpha
Helix 60
60
C
401 413Right-handed alpha
Helix 61
61
C
414 417Right-handed 310
Helix 62
62
D
3 16Right-handed alpha
Helix 63
63
D
20 29Right-handed alpha
Helix 64
64
D
38 42Right-handed 310
Helix 65
65
D
69 82Right-handed alpha
Helix 66
66
D
95 97Right-handed 310
Helix 67
67
D
105 109Right-handed 310
Helix 68
68
D
110 113Right-handed 310
Helix 69
69
D
114 125Right-handed alpha
Helix 70
70
D
150 176Right-handed alpha
Helix 71
71
D
196 211Right-handed alpha
Helix 72
72
D
240 252Right-handed alpha
Helix 73
73
D
267 270Right-handed 310
Helix 74
74
D
271 277Right-handed alpha
Helix 75
75
D
301 314Right-handed alpha
Helix 76
76
D
332 353Right-handed alpha
Helix 77
77
D
355 365Right-handed alpha
Helix 78
78
D
367 379Right-handed alpha
Helix 79
79
D
382 394Right-handed alpha
Helix 80
80
D
401 413Right-handed alpha
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There are 12 sheets in PDB entry 3P14. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 36first strand
Strand 2
A
89 93parallel
Strand 3
A
127 131parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 183first strand
Strand 2
A
220 225parallel
Strand 3
A
254 258parallel
Strand 4
A
282 286parallel
Strand 5
A
320 324parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
236 237anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 36first strand
Strand 2
B
89 93parallel
Strand 3
B
127 131parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 184first strand
Strand 2
B
220 225parallel
Strand 3
B
254 258parallel
Strand 4
B
282 286parallel
Strand 5
B
320 324parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 189first strand
Strand 2
B
236 237anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 36first strand
Strand 2
C
89 93parallel
Strand 3
C
127 131parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
179 183first strand
Strand 2
C
220 225parallel
Strand 3
C
254 258parallel
Strand 4
C
282 286parallel
Strand 5
C
320 324parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
188 189first strand
Strand 2
C
236 237anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 36first strand
Strand 2
D
89 93parallel
Strand 3
D
127 131parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
179 183first strand
Strand 2
D
220 225parallel
Strand 3
D
254 258parallel
Strand 4
D
282 286parallel
Strand 5
D
320 324parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
188 189first strand
Strand 2
D
236 237anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il