Analysis of interatomic Contacts of Structural Units in PDB entry:
3P1Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3P1Z entry

There are 12 chains in PDB entry 3P1Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 3	GLN 170
B	PRO 7	PRO 186
C	GLY 10	GLN 170
D	ASP 3	PRO 186
E	LYS 3	GLN 170
F	PRO 7	PRO 186
G	GLY 10	GLN 170
H	ASP 3	PRO 186
I	LYS 3	GLN 170
J	PRO 7	PRO 186
K	GLY 10	GLN 170
L	ASP 3	PRO 186

There are 66 helices in PDB entry 3P1Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	29	39	Right-handed alpha
Helix 2	2	A	48	58	Right-handed alpha
Helix 3	3	A	67	80	Right-handed alpha
Helix 4	4	A	82	96	Right-handed alpha
Helix 5	5	A	130	143	Right-handed alpha
Helix 6	6	B	23	33	Right-handed alpha
Helix 7	7	B	57	68	Right-handed alpha
Helix 8	8	B	81	92	Right-handed alpha
Helix 9	9	B	92	108	Right-handed alpha
Helix 10	10	B	116	119	Right-handed 310
Helix 11	11	B	150	159	Right-handed alpha
Helix 12	12	C	29	39	Right-handed alpha
Helix 13	13	C	48	58	Right-handed alpha
Helix 14	14	C	68	79	Right-handed alpha
Helix 15	15	C	82	95	Right-handed alpha
Helix 16	16	C	130	142	Right-handed alpha
Helix 17	17	D	23	33	Right-handed alpha
Helix 18	18	D	58	67	Right-handed alpha
Helix 19	19	D	81	91	Right-handed alpha
Helix 20	20	D	92	108	Right-handed alpha
Helix 21	21	D	116	119	Right-handed 310
Helix 22	22	D	148	159	Right-handed alpha
Helix 23	23	E	29	40	Right-handed alpha
Helix 24	24	E	48	58	Right-handed alpha
Helix 25	25	E	69	79	Right-handed alpha
Helix 26	26	E	82	95	Right-handed alpha
Helix 27	27	E	130	143	Right-handed alpha
Helix 28	28	F	23	33	Right-handed alpha
Helix 29	29	F	58	68	Right-handed alpha
Helix 30	30	F	81	91	Right-handed alpha
Helix 31	31	F	92	109	Right-handed alpha
Helix 32	32	F	116	119	Right-handed 310
Helix 33	33	F	150	159	Right-handed alpha
Helix 34	34	G	29	38	Right-handed alpha
Helix 35	35	G	48	58	Right-handed alpha
Helix 36	36	G	68	80	Right-handed alpha
Helix 37	37	G	82	95	Right-handed alpha
Helix 38	38	G	130	142	Right-handed alpha
Helix 39	39	H	23	32	Right-handed alpha
Helix 40	40	H	58	67	Right-handed alpha
Helix 41	41	H	81	91	Right-handed alpha
Helix 42	42	H	92	108	Right-handed alpha
Helix 43	43	H	116	119	Right-handed 310
Helix 44	44	H	149	160	Right-handed alpha
Helix 45	45	I	29	39	Right-handed alpha
Helix 46	46	I	48	59	Right-handed alpha
Helix 47	47	I	68	80	Right-handed alpha
Helix 48	48	I	82	94	Right-handed alpha
Helix 49	49	I	130	143	Right-handed alpha
Helix 50	50	J	23	33	Right-handed alpha
Helix 51	51	J	58	67	Right-handed alpha
Helix 52	52	J	81	90	Right-handed alpha
Helix 53	53	J	92	107	Right-handed alpha
Helix 54	54	J	116	119	Right-handed 310
Helix 55	55	J	150	157	Right-handed alpha
Helix 56	56	K	29	37	Right-handed alpha
Helix 57	57	K	48	59	Right-handed alpha
Helix 58	58	K	68	79	Right-handed alpha
Helix 59	59	K	82	95	Right-handed alpha
Helix 60	60	K	130	143	Right-handed alpha
Helix 61	61	L	23	35	Right-handed alpha
Helix 62	62	L	57	67	Right-handed alpha
Helix 63	63	L	81	91	Right-handed alpha
Helix 64	64	L	92	109	Right-handed alpha
Helix 65	65	L	116	119	Right-handed 310
Helix 66	66	L	148	159	Right-handed alpha

There are 26 sheets in PDB entry 3P1Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	18	first strand
Strand 2	A	21	26	anti-parallel
Strand 3	A	46	47	anti-parallel
Strand 4	A	42	43	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	107	112	anti-parallel
Strand 3	A	115	123	anti-parallel
Strand 4	A	146	152	parallel
Strand 5	A	158	166	anti-parallel
Strand 6	B	175	183	anti-parallel
Strand 7	B	165	172	anti-parallel
Strand 8	B	136	141	parallel
Strand 9	B	122	125	anti-parallel
Strand 10	B	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	129	first strand
Strand 2	B	146	147	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	39	first strand
Strand 2	B	54	56	anti-parallel
Strand 3	B	18	21	anti-parallel
Strand 4	B	10	15	anti-parallel
Strand 5	B	70	73	parallel

Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	C	46	47	anti-parallel
Strand 3	C	22	26	anti-parallel
Strand 4	C	13	17	anti-parallel
Strand 5	C	61	63	parallel
Strand 6	C	66	67	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	107	112	anti-parallel
Strand 3	C	115	123	anti-parallel
Strand 4	C	146	152	parallel
Strand 5	C	158	166	anti-parallel
Strand 6	D	175	183	anti-parallel
Strand 7	D	165	172	anti-parallel
Strand 8	D	136	141	parallel
Strand 9	D	122	125	anti-parallel
Strand 10	D	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	129	first strand
Strand 2	D	146	147	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	39	first strand
Strand 2	D	54	57	anti-parallel
Strand 3	D	18	21	anti-parallel
Strand 4	D	10	15	anti-parallel
Strand 5	D	70	73	parallel
Strand 6	D	79	80	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	43	first strand
Strand 2	E	46	47	anti-parallel
Strand 3	E	22	26	anti-parallel
Strand 4	E	13	17	anti-parallel
Strand 5	E	61	63	parallel
Strand 6	E	66	67	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	101	first strand
Strand 2	E	107	112	anti-parallel
Strand 3	E	115	123	anti-parallel
Strand 4	E	146	152	parallel
Strand 5	E	158	166	anti-parallel
Strand 6	F	175	183	anti-parallel
Strand 7	F	165	172	anti-parallel
Strand 8	F	136	141	parallel
Strand 9	F	122	125	anti-parallel
Strand 10	F	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	128	129	first strand
Strand 2	F	146	147	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	38	39	first strand
Strand 2	F	54	57	anti-parallel
Strand 3	F	18	21	anti-parallel
Strand 4	F	10	15	anti-parallel
Strand 5	F	70	73	parallel
Strand 6	F	79	80	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	43	first strand
Strand 2	G	46	47	anti-parallel
Strand 3	G	22	27	anti-parallel
Strand 4	G	13	17	anti-parallel
Strand 5	G	62	63	parallel

Back to list of sheets
Back to top of page

There are 10 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	101	first strand
Strand 2	G	107	112	anti-parallel
Strand 3	G	115	123	anti-parallel
Strand 4	G	146	152	parallel
Strand 5	G	158	166	anti-parallel
Strand 6	H	175	183	anti-parallel
Strand 7	H	165	172	anti-parallel
Strand 8	H	136	141	parallel
Strand 9	H	122	125	anti-parallel
Strand 10	H	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	128	129	first strand
Strand 2	H	146	147	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	38	39	first strand
Strand 2	H	54	57	anti-parallel
Strand 3	H	18	21	anti-parallel
Strand 4	H	10	15	anti-parallel
Strand 5	H	70	73	parallel
Strand 6	H	79	80	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	22	24	first strand
Strand 2	I	14	17	anti-parallel
Strand 3	I	62	63	parallel
Strand 4	I	66	67	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	42	43	first strand
Strand 2	I	46	47	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	100	101	first strand
Strand 2	I	107	111	anti-parallel
Strand 3	I	116	123	anti-parallel
Strand 4	I	145	152	parallel
Strand 5	I	158	166	anti-parallel
Strand 6	J	177	183	anti-parallel
Strand 7	J	165	170	anti-parallel
Strand 8	J	136	141	parallel
Strand 9	J	122	125	anti-parallel
Strand 10	J	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	128	129	first strand
Strand 2	J	146	147	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	38	39	first strand
Strand 2	J	54	57	anti-parallel
Strand 3	J	18	21	anti-parallel
Strand 4	J	10	15	anti-parallel
Strand 5	J	70	73	parallel
Strand 6	J	79	80	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	43	first strand
Strand 2	K	46	47	anti-parallel
Strand 3	K	22	26	anti-parallel
Strand 4	K	14	17	anti-parallel
Strand 5	K	62	63	parallel

Back to list of sheets
Back to top of page

There are 10 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	100	101	first strand
Strand 2	K	107	111	anti-parallel
Strand 3	K	116	123	anti-parallel
Strand 4	K	146	152	parallel
Strand 5	K	158	166	anti-parallel
Strand 6	L	175	183	anti-parallel
Strand 7	L	165	172	anti-parallel
Strand 8	L	136	141	parallel
Strand 9	L	122	125	anti-parallel
Strand 10	L	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	128	129	first strand
Strand 2	L	146	147	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	18	20	first strand
Strand 2	L	11	15	anti-parallel
Strand 3	L	71	73	parallel
Strand 4	L	79	80	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	38	39	first strand
Strand 2	L	54	55	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3P1Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
3P1Z