Analysis of interatomic Contacts of Structural Units in PDB entry:
3P2M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P2M entry

There is 1 chain in PDB entry 3P2M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 38THR 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3P2M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
47 55Right-handed alpha
Helix 2
2
A
93 96Right-handed 310
Helix 3
3
A
97 104Right-handed alpha
Helix 4
4
A
128 143Right-handed alpha
Helix 5
5
A
154 167Right-handed alpha
Helix 6
6
A
180 191Right-handed alpha
Helix 7
7
A
209 221Right-handed alpha
Helix 8
8
A
225 235Right-handed alpha
Helix 9
9
A
257 268Right-handed alpha
Helix 10
10
A
284 295Right-handed alpha
Helix 11
11
A
310 315Right-handed alpha
Helix 12
12
A
315 327Right-handed alpha
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There are 2 sheets in PDB entry 3P2M. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
72 77anti-parallel
Strand 3
A
108 111anti-parallel
Strand 4
A
84 87parallel
Strand 5
A
149 153parallel
Strand 6
A
173 177parallel
Strand 7
A
272 277parallel
Strand 8
A
298 304parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 239first strand
Strand 2
A
245 247anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il