Analysis of interatomic Contacts of Structural Units in PDB entry:
3P3Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P3Q entry

There are 2 chains in PDB entry 3P3Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MSE 28ASP 285
B
MSE 28ASP 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3P3Q. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
36 49Right-handed alpha
Helix 2
2
A
53 62Right-handed alpha
Helix 3
3
A
64 77Right-handed alpha
Helix 4
4
A
88 97Right-handed alpha
Helix 5
5
A
97 107Right-handed alpha
Helix 6
6
A
108 111Right-handed 310
Helix 7
7
A
123 144Right-handed alpha
Helix 8
8
A
149 160Right-handed alpha
Helix 9
9
A
161 171Right-handed alpha
Helix 10
10
A
171 182Right-handed alpha
Helix 11
11
A
184 196Right-handed alpha
Helix 12
12
A
198 210Right-handed alpha
Helix 13
13
A
213 224Right-handed alpha
Helix 14
14
A
233 252Right-handed alpha
Helix 15
15
A
262 272Right-handed alpha
Helix 16
16
A
277 282Right-handed alpha
Helix 17
17
B
37 50Right-handed alpha
Helix 18
18
B
53 62Right-handed alpha
Helix 19
19
B
64 77Right-handed alpha
Helix 20
20
B
78 81Right-handed 310
Helix 21
21
B
88 97Right-handed alpha
Helix 22
22
B
97 112Right-handed alpha
Helix 23
23
B
123 146Right-handed alpha
Helix 24
24
B
149 160Right-handed alpha
Helix 25
25
B
161 171Right-handed alpha
Helix 26
26
B
171 182Right-handed alpha
Helix 27
27
B
183 196Right-handed alpha
Helix 28
28
B
198 210Right-handed alpha
Helix 29
29
B
213 224Right-handed alpha
Helix 30
30
B
232 252Right-handed alpha
Helix 31
31
B
262 272Right-handed alpha
Helix 32
32
B
277 284Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3P3Q.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
35 36first strand
Strand 2
B
113 114parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il