Analysis of interatomic Contacts of Structural Units in PDB entry:
3P3V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P3V entry

There are 2 chains in PDB entry 3P3V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ILE 162
B
 GLY 0ILE 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3P3V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
19 27Right-handed alpha
Helix 3
3
A
36 42Right-handed alpha
Helix 4
4
A
42 50Right-handed alpha
Helix 5
5
A
51 53Right-handed 310
Helix 6
6
A
63 71Right-handed alpha
Helix 7
7
A
72 74Right-handed 310
Helix 8
8
A
86 96Right-handed alpha
Helix 9
9
A
124 137Right-handed alpha
Helix 10
10
A
151 155Right-handed 310
Helix 11
11
A
157 162Right-handed 310
Helix 12
12
B
14 18Right-handed 310
Helix 13
13
B
19 28Right-handed alpha
Helix 14
14
B
36 41Right-handed alpha
Helix 15
15
B
42 51Right-handed alpha
Helix 16
16
B
63 71Right-handed alpha
Helix 17
17
B
72 74Right-handed 310
Helix 18
18
B
86 96Right-handed alpha
Helix 19
19
B
124 137Right-handed alpha
Helix 20
20
B
151 155Right-handed 310
Helix 21
21
B
157 162Right-handed 310
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There are 4 sheets in PDB entry 3P3V. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
31 35parallel
Strand 3
A
79 84parallel
Strand 4
A
5 12parallel
Strand 5
A
102 107parallel
Strand 6
A
141 143parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
122 123anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
31 35parallel
Strand 3
B
80 84parallel
Strand 4
B
6 12parallel
Strand 5
B
102 107parallel
Strand 6
B
141 143parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 116first strand
Strand 2
B
122 123anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il