Analysis of interatomic Contacts of Structural Units in PDB entry:
3P45


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P45 entry

There are 13 chains in PDB entry 3P45 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 31CYS 163
B
 TYR 198LYS 291
C
 PHE 31ALA 162
D
 LEU 200LYS 291
E
 PHE 31ALA 162
F
 ALA 202SER 292
G
 ASP 32ALA 162
H
 LEU 200LYS 291
I
 PHE 31CYS 163
J
 PRO 201SER 292
K
 PHE 31CYS 163
L
 ALA 202LYS 291
M
 PHE 31PHE 78
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 3P45. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 60Right-handed 310
Helix 2
2
A
66 81Right-handed alpha
Helix 3
3
A
92 105Right-handed alpha
Helix 4
4
A
136 141Right-handed alpha
Helix 5
5
A
142 152Right-handed 310
Helix 6
6
B
226 240Right-handed alpha
Helix 7
7
B
244 259Right-handed alpha
Helix 8
8
C
56 60Right-handed 310
Helix 9
9
C
66 81Right-handed alpha
Helix 10
10
C
92 104Right-handed alpha
Helix 11
11
C
136 142Right-handed alpha
Helix 12
12
C
148 152Right-handed 310
Helix 13
13
D
226 240Right-handed alpha
Helix 14
14
D
244 258Right-handed alpha
Helix 15
15
E
56 60Right-handed 310
Helix 16
16
E
66 81Right-handed alpha
Helix 17
17
E
92 104Right-handed alpha
Helix 18
18
E
136 141Right-handed alpha
Helix 19
19
E
142 152Right-handed 310
Helix 20
20
F
226 240Right-handed alpha
Helix 21
21
F
244 259Right-handed alpha
Helix 22
22
G
56 60Right-handed 310
Helix 23
23
G
66 82Right-handed alpha
Helix 24
24
G
92 106Right-handed alpha
Helix 25
25
G
136 141Right-handed alpha
Helix 26
26
G
142 152Right-handed 310
Helix 27
27
H
226 240Right-handed alpha
Helix 28
28
H
244 259Right-handed alpha
Helix 29
29
I
56 60Right-handed 310
Helix 30
30
I
66 81Right-handed alpha
Helix 31
31
I
92 106Right-handed alpha
Helix 32
32
I
136 142Right-handed alpha
Helix 33
33
I
148 152Right-handed 310
Helix 34
34
J
226 240Right-handed alpha
Helix 35
35
J
244 259Right-handed alpha
Helix 36
36
K
56 60Right-handed 310
Helix 37
37
K
66 81Right-handed alpha
Helix 38
38
K
92 106Right-handed alpha
Helix 39
39
K
136 141Right-handed alpha
Helix 40
40
K
142 144Right-handed 310
Helix 41
41
K
148 152Right-handed 310
Helix 42
42
L
226 240Right-handed alpha
Helix 43
43
L
244 257Right-handed alpha
Helix 44
44
M
56 60Right-handed 310
Helix 45
45
M
66 81Right-handed alpha
Helix 46
46
M
92 106Right-handed alpha
Helix 47
47
M
136 141Right-handed alpha
Helix 48
48
M
142 144Right-handed 310
Helix 49
49
M
148 152Right-handed 310
Helix 50
50
N
226 240Right-handed alpha
Helix 51
51
N
244 259Right-handed alpha
Helix 52
52
O
56 60Right-handed 310
Helix 53
53
O
66 80Right-handed alpha
Helix 54
54
O
92 106Right-handed alpha
Helix 55
55
O
136 141Right-handed alpha
Helix 56
56
O
142 144Right-handed 310
Helix 57
57
O
148 152Right-handed 310
Helix 58
58
P
226 240Right-handed alpha
Helix 59
59
P
244 259Right-handed alpha
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There are 12 sheets in PDB entry 3P45. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 89first strand
Strand 2
A
46 51parallel
Strand 3
A
114 119parallel
Strand 4
A
156 161parallel
Strand 5
B
206 210parallel
Strand 6
B
277 280anti-parallel
Strand 7
D
277 280anti-parallel
Strand 8
D
206 210anti-parallel
Strand 9
C
156 161parallel
Strand 10
C
114 119parallel
Strand 11
C
46 51parallel
Strand 12
C
84 89parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
126 128anti-parallel
Strand 3
A
133 135anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
122 123first strand
Strand 2
C
126 128anti-parallel
Strand 3
C
133 135anti-parallel
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There are 12 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
84 89first strand
Strand 2
E
46 51parallel
Strand 3
E
114 119parallel
Strand 4
E
156 161parallel
Strand 5
F
206 210parallel
Strand 6
F
277 280anti-parallel
Strand 7
H
277 280anti-parallel
Strand 8
H
206 210anti-parallel
Strand 9
G
156 161parallel
Strand 10
G
114 119parallel
Strand 11
G
46 51parallel
Strand 12
G
84 89parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
126 128first strand
Strand 2
E
133 135anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
126 128first strand
Strand 2
G
133 135anti-parallel
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There are 12 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
84 89first strand
Strand 2
I
46 51parallel
Strand 3
I
114 120parallel
Strand 4
I
156 162parallel
Strand 5
J
206 210parallel
Strand 6
J
277 280anti-parallel
Strand 7
L
277 280anti-parallel
Strand 8
L
206 210anti-parallel
Strand 9
K
156 161parallel
Strand 10
K
114 119parallel
Strand 11
K
46 51parallel
Strand 12
K
84 89parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
122 123first strand
Strand 2
I
126 128anti-parallel
Strand 3
I
133 135anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
122 123first strand
Strand 2
K
126 128anti-parallel
Strand 3
K
133 135anti-parallel
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There are 12 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
84 89first strand
Strand 2
M
46 51parallel
Strand 3
M
114 119parallel
Strand 4
M
156 161parallel
Strand 5
N
206 210parallel
Strand 6
N
277 280anti-parallel
Strand 7
P
277 280anti-parallel
Strand 8
P
206 210anti-parallel
Strand 9
O
156 161parallel
Strand 10
O
114 119parallel
Strand 11
O
46 51parallel
Strand 12
O
84 89parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
122 123first strand
Strand 2
M
126 128anti-parallel
Strand 3
M
133 135anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
126 128first strand
Strand 2
O
133 135anti-parallel
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