Analysis of interatomic Contacts of Structural Units in PDB entry:
3P5P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P5P entry

There is 1 chain in PDB entry 3P5P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 111VAL 862
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3P5P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
111 129Right-handed alpha
Helix 2
2
A
138 148Right-handed alpha
Helix 3
3
A
161 171Right-handed alpha
Helix 4
4
A
185 203Right-handed alpha
Helix 5
5
A
206 222Right-handed alpha
Helix 6
6
A
233 248Right-handed alpha
Helix 7
7
A
256 275Right-handed alpha
Helix 8
8
A
281 295Right-handed 310
Helix 9
9
A
298 304Right-handed 310
Helix 10
10
A
313 325Right-handed alpha
Helix 11
11
A
326 341Right-handed alpha
Helix 12
12
A
350 366Right-handed alpha
Helix 13
13
A
367 370Right-handed 310
Helix 14
14
A
371 385Right-handed alpha
Helix 15
15
A
401 415Right-handed alpha
Helix 16
16
A
420 428Right-handed 310
Helix 17
17
A
444 456Right-handed alpha
Helix 18
18
A
462 483Right-handed alpha
Helix 19
19
A
488 500Right-handed alpha
Helix 20
20
A
501 505Right-handed 310
Helix 21
21
A
506 518Right-handed alpha
Helix 22
22
A
537 569Right-handed alpha
Helix 23
23
A
577 588Right-handed alpha
Helix 24
24
A
592 594Right-handed 310
Helix 25
25
A
595 619Right-handed alpha
Helix 26
26
A
621 635Right-handed alpha
Helix 27
27
A
639 643Right-handed 310
Helix 28
28
A
644 670Right-handed alpha
Helix 29
29
A
673 697Right-handed alpha
Helix 30
30
A
702 714Right-handed alpha
Helix 31
31
A
715 726Right-handed alpha
Helix 32
32
A
732 734Right-handed 310
Helix 33
33
A
735 740Right-handed alpha
Helix 34
34
A
743 767Right-handed alpha
Helix 35
35
A
773 782Right-handed alpha
Helix 36
36
A
786 811Right-handed alpha
Helix 37
37
A
817 827Right-handed alpha
Helix 38
38
A
827 835Right-handed alpha
Helix 39
39
A
847 857Right-handed alpha
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There are 2 sheets in PDB entry 3P5P. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 151first strand
Strand 2
A
157 159anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 525first strand
Strand 2
A
529 530anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il