Analysis of interatomic Contacts of Structural Units in PDB entry:
3P5R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P5R entry

There are 2 chains in PDB entry 3P5R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 111VAL 862
B
 THR 111VAL 862
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 3P5R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
111 130Right-handed alpha
Helix 2
2
A
138 148Right-handed alpha
Helix 3
3
A
161 171Right-handed alpha
Helix 4
4
A
185 203Right-handed alpha
Helix 5
5
A
206 222Right-handed alpha
Helix 6
6
A
233 248Right-handed alpha
Helix 7
7
A
258 275Right-handed alpha
Helix 8
8
A
281 295Right-handed 310
Helix 9
9
A
299 304Right-handed 310
Helix 10
10
A
313 325Right-handed alpha
Helix 11
11
A
326 340Right-handed alpha
Helix 12
12
A
350 365Right-handed alpha
Helix 13
13
A
367 370Right-handed 310
Helix 14
14
A
371 384Right-handed alpha
Helix 15
15
A
401 415Right-handed alpha
Helix 16
16
A
420 428Right-handed 310
Helix 17
17
A
444 456Right-handed alpha
Helix 18
18
A
462 483Right-handed alpha
Helix 19
19
A
488 500Right-handed alpha
Helix 20
20
A
501 505Right-handed 310
Helix 21
21
A
506 518Right-handed alpha
Helix 22
22
A
537 569Right-handed alpha
Helix 23
23
A
576 588Right-handed alpha
Helix 24
24
A
592 594Right-handed 310
Helix 25
25
A
595 618Right-handed alpha
Helix 26
26
A
621 635Right-handed alpha
Helix 27
27
A
639 643Right-handed 310
Helix 28
28
A
644 670Right-handed alpha
Helix 29
29
A
673 698Right-handed alpha
Helix 30
30
A
702 714Right-handed alpha
Helix 31
31
A
720 725Right-handed alpha
Helix 32
32
A
735 740Right-handed alpha
Helix 33
33
A
743 768Right-handed alpha
Helix 34
34
A
773 782Right-handed alpha
Helix 35
35
A
786 811Right-handed alpha
Helix 36
36
A
817 826Right-handed alpha
Helix 37
37
A
827 837Right-handed alpha
Helix 38
38
A
847 857Right-handed alpha
Helix 39
39
B
111 130Right-handed alpha
Helix 40
40
B
138 147Right-handed alpha
Helix 41
41
B
161 171Right-handed alpha
Helix 42
42
B
185 203Right-handed alpha
Helix 43
43
B
206 222Right-handed alpha
Helix 44
44
B
233 248Right-handed alpha
Helix 45
45
B
256 275Right-handed alpha
Helix 46
46
B
281 291Right-handed 310
Helix 47
47
B
298 304Right-handed 310
Helix 48
48
B
313 325Right-handed alpha
Helix 49
49
B
326 341Right-handed alpha
Helix 50
50
B
350 366Right-handed alpha
Helix 51
51
B
367 370Right-handed 310
Helix 52
52
B
371 386Right-handed alpha
Helix 53
53
B
401 415Right-handed alpha
Helix 54
54
B
420 428Right-handed 310
Helix 55
55
B
444 456Right-handed alpha
Helix 56
56
B
462 483Right-handed alpha
Helix 57
57
B
488 500Right-handed alpha
Helix 58
58
B
501 505Right-handed 310
Helix 59
59
B
506 516Right-handed alpha
Helix 60
60
B
537 569Right-handed alpha
Helix 61
61
B
580 588Right-handed alpha
Helix 62
62
B
592 594Right-handed 310
Helix 63
63
B
595 618Right-handed alpha
Helix 64
64
B
621 635Right-handed alpha
Helix 65
65
B
639 643Right-handed 310
Helix 66
66
B
644 670Right-handed alpha
Helix 67
67
B
673 697Right-handed alpha
Helix 68
68
B
702 714Right-handed alpha
Helix 69
69
B
715 726Right-handed alpha
Helix 70
70
B
735 740Right-handed alpha
Helix 71
71
B
743 769Right-handed alpha
Helix 72
72
B
773 782Right-handed alpha
Helix 73
73
B
786 811Right-handed alpha
Helix 74
74
B
817 826Right-handed alpha
Helix 75
75
B
827 835Right-handed alpha
Helix 76
76
B
847 857Right-handed alpha
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There are 3 sheets in PDB entry 3P5R. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 151first strand
Strand 2
A
157 159anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 525first strand
Strand 2
A
529 530anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
524 525first strand
Strand 2
B
529 530anti-parallel
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