Analysis of interatomic Contacts of Structural Units in PDB entry:
3P6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P6B entry

There are 2 chains in PDB entry 3P6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 19PRO 204
B
 HIS 19PRO 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3P6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 35Right-handed 310
Helix 2
2
A
86 88Right-handed 310
Helix 3
3
A
172 176Right-handed 310
Helix 4
4
B
31 35Right-handed 310
Helix 5
5
B
86 88Right-handed 310
Helix 6
6
B
172 176Right-handed 310
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There are 5 sheets in PDB entry 3P6B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
90 99anti-parallel
Strand 3
A
162 170anti-parallel
Strand 4
A
117 125anti-parallel
Strand 5
A
132 134anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
90 99anti-parallel
Strand 3
A
162 170anti-parallel
Strand 4
A
117 125anti-parallel
Strand 5
A
141 143anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 66first strand
Strand 2
A
74 83anti-parallel
Strand 3
A
181 191anti-parallel
Strand 4
A
104 113anti-parallel
Strand 5
A
147 156anti-parallel
Strand 6
B
147 156anti-parallel
Strand 7
B
104 113anti-parallel
Strand 8
B
181 191anti-parallel
Strand 9
B
74 83anti-parallel
Strand 10
B
58 66anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
90 99anti-parallel
Strand 3
B
162 170anti-parallel
Strand 4
B
117 125anti-parallel
Strand 5
B
132 134anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
90 99anti-parallel
Strand 3
B
162 170anti-parallel
Strand 4
B
117 125anti-parallel
Strand 5
B
141 143anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il