Analysis of interatomic Contacts of Structural Units in PDB entry:
3P6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P6L entry

There is 1 chain in PDB entry 3P6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0LEU 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3P6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 30Right-handed alpha
Helix 2
2
A
39 42Right-handed 310
Helix 3
3
A
45 56Right-handed alpha
Helix 4
4
A
70 74Right-handed 310
Helix 5
5
A
83 97Right-handed alpha
Helix 6
6
A
113 125Right-handed alpha
Helix 7
7
A
135 137Right-handed 310
Helix 8
8
A
138 150Right-handed alpha
Helix 9
9
A
166 175Right-handed alpha
Helix 10
10
A
187 193Right-handed alpha
Helix 11
11
A
196 204Right-handed alpha
Helix 12
12
A
237 248Right-handed alpha
Helix 13
13
A
265 284Right-handed alpha
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There are 3 sheets in PDB entry 3P6L. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
60 63parallel
Strand 3
A
100 107parallel
Strand 4
A
129 132parallel
Strand 5
A
152 156parallel
Strand 6
A
181 186parallel
Strand 7
A
208 213parallel
Strand 8
A
252 256parallel
Strand 9
A
32 37parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
77 78anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
228 229anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il