Analysis of interatomic Contacts of Structural Units in PDB entry:
3P83


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3P83 entry

There are 6 chains in PDB entry 3P83 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 244
B
 MET 1SER 244
C
 MET 1GLU 243
D
 SER -7PHE 205
E
 LEU 0PHE 205
F
 MET 1ARG 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 3P83. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 20Right-handed alpha
Helix 2
2
A
54 56Right-handed 310
Helix 3
3
A
71 79Right-handed alpha
Helix 4
4
A
112 116Right-handed 310
Helix 5
5
A
135 147Right-handed alpha
Helix 6
6
A
195 203Right-handed alpha
Helix 7
7
B
8 20Right-handed alpha
Helix 8
8
B
54 56Right-handed 310
Helix 9
9
B
71 79Right-handed alpha
Helix 10
10
B
112 116Right-handed 310
Helix 11
11
B
135 147Right-handed alpha
Helix 12
12
B
195 203Right-handed alpha
Helix 13
13
C
8 20Right-handed alpha
Helix 14
14
C
54 56Right-handed 310
Helix 15
15
C
71 79Right-handed alpha
Helix 16
16
C
112 116Right-handed 310
Helix 17
17
C
135 147Right-handed alpha
Helix 18
18
C
195 203Right-handed alpha
Helix 19
19
D
-3 0Right-handed 310
Helix 20
20
D
26 33Right-handed alpha
Helix 21
21
D
42 56Right-handed alpha
Helix 22
22
D
65 73Right-handed alpha
Helix 23
23
D
77 94Right-handed alpha
Helix 24
24
D
106 119Right-handed alpha
Helix 25
25
D
128 131Right-handed 310
Helix 26
26
D
132 158Right-handed alpha
Helix 27
27
D
167 181Right-handed alpha
Helix 28
28
D
191 199Right-handed alpha
Helix 29
29
D
201 205Right-handed 310
Helix 30
30
E
26 33Right-handed alpha
Helix 31
31
E
42 56Right-handed alpha
Helix 32
32
E
65 73Right-handed alpha
Helix 33
33
E
77 94Right-handed alpha
Helix 34
34
E
106 119Right-handed alpha
Helix 35
35
E
127 131Right-handed 310
Helix 36
36
E
132 158Right-handed alpha
Helix 37
37
E
167 181Right-handed alpha
Helix 38
38
E
201 205Right-handed 310
Helix 39
39
F
26 32Right-handed alpha
Helix 40
40
F
42 57Right-handed alpha
Helix 41
41
F
65 73Right-handed alpha
Helix 42
42
F
77 94Right-handed alpha
Helix 43
43
F
106 119Right-handed alpha
Helix 44
44
F
127 131Right-handed 310
Helix 45
45
F
132 158Right-handed alpha
Helix 46
46
F
167 181Right-handed alpha
Helix 47
47
F
188 193Right-handed 310
Helix 48
48
F
195 199Right-handed 310
Helix 49
49
F
201 205Right-handed 310
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There are 10 sheets in PDB entry 3P83. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
2 7anti-parallel
Strand 3
A
86 91anti-parallel
Strand 4
A
96 101anti-parallel
Strand 5
A
104 109anti-parallel
Strand 6
B
170 176anti-parallel
Strand 7
B
160 166anti-parallel
Strand 8
B
151 157anti-parallel
Strand 9
B
189 194anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 70first strand
Strand 2
A
24 29anti-parallel
Strand 3
A
33 39anti-parallel
Strand 4
A
45 52anti-parallel
Strand 5
A
232 238anti-parallel
Strand 6
A
221 227anti-parallel
Strand 7
A
210 215anti-parallel
Strand 8
A
129 134anti-parallel
Strand 9
A
183 184anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 194first strand
Strand 2
A
151 157anti-parallel
Strand 3
A
160 166anti-parallel
Strand 4
A
170 176anti-parallel
Strand 5
C
104 109anti-parallel
Strand 6
C
96 101anti-parallel
Strand 7
C
86 91anti-parallel
Strand 8
C
2 7anti-parallel
Strand 9
C
58 61anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 61first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
86 91anti-parallel
Strand 4
B
96 101anti-parallel
Strand 5
B
104 109anti-parallel
Strand 6
C
170 176anti-parallel
Strand 7
C
160 166anti-parallel
Strand 8
C
151 157anti-parallel
Strand 9
C
189 194anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 70first strand
Strand 2
B
24 29anti-parallel
Strand 3
B
33 39anti-parallel
Strand 4
B
45 52anti-parallel
Strand 5
B
232 238anti-parallel
Strand 6
B
221 227anti-parallel
Strand 7
B
210 215anti-parallel
Strand 8
B
129 134anti-parallel
Strand 9
B
183 184anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 70first strand
Strand 2
C
24 29anti-parallel
Strand 3
C
33 39anti-parallel
Strand 4
C
45 52anti-parallel
Strand 5
C
232 238anti-parallel
Strand 6
C
221 227anti-parallel
Strand 7
C
210 215anti-parallel
Strand 8
C
129 134anti-parallel
Strand 9
C
183 184anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
241 242first strand
Strand 2
E
198 199anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 64first strand
Strand 2
D
17 24anti-parallel
Strand 3
D
2 8anti-parallel
Strand 4
D
97 102parallel
Strand 5
D
121 126parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 64first strand
Strand 2
E
17 24anti-parallel
Strand 3
E
2 8anti-parallel
Strand 4
E
97 101parallel
Strand 5
E
121 125parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
58 64first strand
Strand 2
F
17 23anti-parallel
Strand 3
F
2 8anti-parallel
Strand 4
F
97 101parallel
Strand 5
F
121 125parallel
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