Analysis of interatomic Contacts of Structural Units in PDB entry:
3PAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PAW entry

There are 4 chains in PDB entry 3PAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 746
B
 MET 1GLN 746
C
 MET 1GLN 746
D
 MET 1GLN 746
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are107 helices in PDB entry 3PAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 41Right-handed alpha
Helix 2
2
A
43 47Right-handed 310
Helix 3
3
A
52 64Right-handed alpha
Helix 4
4
A
65 68Right-handed 310
Helix 5
5
A
74 90Right-handed alpha
Helix 6
6
A
93 98Right-handed alpha
Helix 7
7
A
144 149Right-handed alpha
Helix 8
8
A
166 170Right-handed 310
Helix 9
9
A
182 185Right-handed 310
Helix 10
10
A
186 194Right-handed alpha
Helix 11
11
A
234 241Right-handed alpha
Helix 12
12
A
335 343Right-handed alpha
Helix 13
13
A
353 356Right-handed 310
Helix 14
14
A
388 393Right-handed alpha
Helix 15
15
A
394 399Right-handed alpha
Helix 16
16
A
408 413Right-handed alpha
Helix 17
17
A
468 473Right-handed alpha
Helix 18
18
A
473 481Right-handed alpha
Helix 19
19
A
493 498Right-handed alpha
Helix 20
20
A
511 520Right-handed alpha
Helix 21
21
A
525 537Right-handed alpha
Helix 22
22
A
538 543Right-handed alpha
Helix 23
23
A
563 567Right-handed 310
Helix 24
24
A
584 589Right-handed alpha
Helix 25
25
A
590 593Right-handed 310
Helix 26
26
A
611 616Right-handed alpha
Helix 27
27
A
657 662Right-handed 310
Helix 28
28
B
39 47Right-handed alpha
Helix 29
29
B
59 64Right-handed alpha
Helix 30
30
B
74 87Right-handed alpha
Helix 31
31
B
119 124Right-handed 310
Helix 32
32
B
127 132Right-handed alpha
Helix 33
33
B
138 142Right-handed 310
Helix 34
34
B
144 149Right-handed alpha
Helix 35
35
B
166 174Right-handed alpha
Helix 36
36
B
186 195Right-handed alpha
Helix 37
37
B
202 207Right-handed alpha
Helix 38
38
B
227 232Right-handed alpha
Helix 39
39
B
233 238Right-handed alpha
Helix 40
40
B
279 284Right-handed alpha
Helix 41
41
B
363 368Right-handed alpha
Helix 42
42
B
387 396Right-handed alpha
Helix 43
43
B
467 481Right-handed alpha
Helix 44
44
B
493 498Right-handed alpha
Helix 45
45
B
511 517Right-handed alpha
Helix 46
46
B
525 530Right-handed alpha
Helix 47
47
B
530 535Right-handed alpha
Helix 48
48
B
539 544Right-handed alpha
Helix 49
49
B
563 568Right-handed 310
Helix 50
50
B
588 593Right-handed alpha
Helix 51
51
B
611 616Right-handed alpha
Helix 52
52
B
642 648Right-handed alpha
Helix 53
53
B
649 651Right-handed 310
Helix 54
54
B
677 682Right-handed alpha
Helix 55
55
B
693 697Right-handed 310
Helix 56
56
B
729 734Right-handed alpha
Helix 57
57
C
36 44Right-handed alpha
Helix 58
58
C
45 47Right-handed 310
Helix 59
59
C
56 67Right-handed alpha
Helix 60
60
C
74 83Right-handed alpha
Helix 61
61
C
93 98Right-handed alpha
Helix 62
62
C
120 124Right-handed 310
Helix 63
63
C
144 154Right-handed alpha
Helix 64
64
C
166 171Right-handed alpha
Helix 65
65
C
182 185Right-handed 310
Helix 66
66
C
186 195Right-handed alpha
Helix 67
67
C
201 208Right-handed alpha
Helix 68
68
C
230 235Right-handed alpha
Helix 69
69
C
279 284Right-handed alpha
Helix 70
70
C
308 313Right-handed alpha
Helix 71
71
C
335 341Right-handed alpha
Helix 72
72
C
385 395Right-handed alpha
Helix 73
73
C
406 411Right-handed alpha
Helix 74
74
C
466 487Right-handed alpha
Helix 75
75
C
496 503Right-handed alpha
Helix 76
76
C
511 517Right-handed alpha
Helix 77
77
C
527 532Right-handed alpha
Helix 78
78
C
538 543Right-handed alpha
Helix 79
79
C
549 554Right-handed alpha
Helix 80
80
C
586 594Right-handed alpha
Helix 81
81
C
611 616Right-handed alpha
Helix 82
82
C
677 684Right-handed alpha
Helix 83
83
C
698 702Right-handed 310
Helix 84
84
C
729 734Right-handed alpha
Helix 85
85
D
39 43Right-handed 310
Helix 86
86
D
52 57Right-handed alpha
Helix 87
87
D
59 64Right-handed alpha
Helix 88
88
D
75 84Right-handed alpha
Helix 89
89
D
117 123Right-handed alpha
Helix 90
90
D
138 142Right-handed 310
Helix 91
91
D
144 154Right-handed alpha
Helix 92
92
D
166 172Right-handed alpha
Helix 93
93
D
186 192Right-handed alpha
Helix 94
94
D
235 239Right-handed 310
Helix 95
95
D
277 281Right-handed 310
Helix 96
96
D
337 341Right-handed 310
Helix 97
97
D
406 413Right-handed alpha
Helix 98
98
D
473 478Right-handed alpha
Helix 99
99
D
493 498Right-handed alpha
Helix 100
100
D
499 501Right-handed 310
Helix 101
101
D
511 517Right-handed alpha
Helix 102
102
D
525 533Right-handed alpha
Helix 103
103
D
571 575Right-handed 310
Helix 104
104
D
584 592Right-handed 310
Helix 105
105
D
610 616Right-handed alpha
Helix 106
106
D
656 660Right-handed 310
Helix 107
107
D
720 729Right-handed alpha
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There are 18 sheets in PDB entry 3PAW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
11 12anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
445 448anti-parallel
Strand 3
A
506 509parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
297 300parallel
Strand 3
A
330 331parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 351first strand
Strand 2
A
380 383anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
714 715first strand
Strand 2
A
743 744parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 199first strand
Strand 2
B
447 449anti-parallel
Strand 3
B
509 510parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
299 301first strand
Strand 2
B
330 334parallel
Strand 3
B
403 406parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 349first strand
Strand 2
B
382 383anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
628 629first strand
Strand 2
B
640 641anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
714 715first strand
Strand 2
B
743 744parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
198 199first strand
Strand 2
C
447 448anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
218 219first strand
Strand 2
C
247 251parallel
Strand 3
C
298 301parallel
Strand 4
C
329 332parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
404 405first strand
Strand 2
C
738 740anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
714 715first strand
Strand 2
C
743 744parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
199 200first strand
Strand 2
D
445 447anti-parallel
Strand 3
D
506 508parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
347 349first strand
Strand 2
D
382 384anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
454 455first strand
Strand 2
D
464 465anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
714 715first strand
Strand 2
D
743 744parallel
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