Analysis of interatomic Contacts of Structural Units in PDB entry:
3PC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PC2 entry

There is 1 chain in PDB entry 3PC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 14LYS 513
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3PC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 58Right-handed 310
Helix 2
2
A
68 73Right-handed alpha
Helix 3
3
A
84 87Right-handed 310
Helix 4
4
A
92 107Right-handed alpha
Helix 5
5
A
122 136Right-handed alpha
Helix 6
6
A
148 158Right-handed alpha
Helix 7
7
A
176 187Right-handed alpha
Helix 8
8
A
200 209Right-handed alpha
Helix 9
9
A
209 218Right-handed alpha
Helix 10
10
A
232 246Right-handed alpha
Helix 11
11
A
264 269Right-handed 310
Helix 12
12
A
290 294Right-handed 310
Helix 13
13
A
301 304Right-handed 310
Helix 14
14
A
305 317Right-handed alpha
Helix 15
15
A
321 336Right-handed alpha
Helix 16
16
A
352 356Right-handed 310
Helix 17
17
A
361 368Right-handed alpha
Helix 18
18
A
385 390Right-handed 310
Helix 19
19
A
403 415Right-handed alpha
Helix 20
20
A
435 446Right-handed alpha
Helix 21
21
A
452 455Right-handed 310
Helix 22
22
A
469 478Right-handed alpha
Helix 23
23
A
501 512Right-handed alpha
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There are 4 sheets in PDB entry 3PC2. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
78 82anti-parallel
Strand 3
A
343 347parallel
Strand 4
A
224 228parallel
Strand 5
A
250 256parallel
Strand 6
A
296 300parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 165first strand
Strand 2
A
138 144parallel
Strand 3
A
115 119parallel
Strand 4
A
191 193parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 399first strand
Strand 2
A
418 422parallel
Strand 3
A
429 434anti-parallel
Strand 4
A
457 458anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
463 465first strand
Strand 2
A
483 488parallel
Strand 3
A
494 500anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il