Analysis of interatomic Contacts of Structural Units in PDB entry:
3PG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PG1 entry

There is 1 chain in PDB entry 3PG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5ASN 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3PG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 19Right-handed alpha
Helix 2
2
A
68 85Right-handed alpha
Helix 3
3
A
119 125Right-handed alpha
Helix 4
4
A
131 152Right-handed alpha
Helix 5
5
A
160 162Right-handed 310
Helix 6
6
A
195 199Right-handed 310
Helix 7
7
A
200 205Right-handed alpha
Helix 8
8
A
212 229Right-handed alpha
Helix 9
9
A
237 250Right-handed alpha
Helix 10
10
A
253 260Right-handed alpha
Helix 11
11
A
262 269Right-handed alpha
Helix 12
12
A
280 285Right-handed alpha
Helix 13
13
A
289 300Right-handed alpha
Helix 14
14
A
303 307Right-handed 310
Helix 15
15
A
309 315Right-handed alpha
Helix 16
16
A
316 320Right-handed 310
Helix 17
17
A
324 329Right-handed 310
Helix 18
18
A
344 360Right-handed alpha
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There are 3 sheets in PDB entry 3PG1. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 32first strand
Strand 2
A
35 41anti-parallel
Strand 3
A
47 53anti-parallel
Strand 4
A
107 113anti-parallel
Strand 5
A
95 99anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
63 64anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
164 166anti-parallel
Strand 3
A
172 174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il