Analysis of interatomic Contacts of Structural Units in PDB entry:
3PG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PG7 entry

There are 2 chains in PDB entry 3PG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1560ASP 1815
B
 LYS 1560ASP 1815
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3PG7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1565 1570Right-handed alpha
Helix 2
2
A
1590 1592Right-handed 310
Helix 3
3
A
1598 1611Right-handed alpha
Helix 4
4
A
1628 1632Right-handed 310
Helix 5
5
A
1634 1641Right-handed alpha
Helix 6
6
A
1646 1652Right-handed alpha
Helix 7
7
A
1662 1672Right-handed alpha
Helix 8
8
A
1672 1677Right-handed alpha
Helix 9
9
A
1692 1697Right-handed 310
Helix 10
10
A
1699 1703Right-handed 310
Helix 11
11
A
1706 1712Right-handed alpha
Helix 12
12
A
1794 1812Right-handed alpha
Helix 13
13
B
1561 1570Right-handed alpha
Helix 14
14
B
1590 1592Right-handed 310
Helix 15
15
B
1598 1611Right-handed alpha
Helix 16
16
B
1628 1632Right-handed 310
Helix 17
17
B
1634 1641Right-handed alpha
Helix 18
18
B
1646 1652Right-handed alpha
Helix 19
19
B
1662 1672Right-handed alpha
Helix 20
20
B
1673 1680Right-handed 310
Helix 21
21
B
1691 1697Right-handed 310
Helix 22
22
B
1699 1703Right-handed 310
Helix 23
23
B
1706 1712Right-handed alpha
Helix 24
24
B
1794 1812Right-handed alpha
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There are 6 sheets in PDB entry 3PG7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1572 1577first strand
Strand 2
A
1583 1588anti-parallel
Strand 3
A
1618 1623parallel
Strand 4
A
1653 1659parallel
Strand 5
A
1685 1688parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1758 1762first strand
Strand 2
A
1740 1745anti-parallel
Strand 3
A
1730 1736anti-parallel
Strand 4
A
1717 1725anti-parallel
Strand 5
A
1788 1791anti-parallel
Strand 6
A
1776 1781anti-parallel
Strand 7
A
1766 1773anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1748 1750first strand
Strand 2
A
1753 1755anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1572 1577first strand
Strand 2
B
1583 1588anti-parallel
Strand 3
B
1618 1623parallel
Strand 4
B
1653 1659parallel
Strand 5
B
1685 1688parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1758 1762first strand
Strand 2
B
1740 1745anti-parallel
Strand 3
B
1730 1736anti-parallel
Strand 4
B
1717 1725anti-parallel
Strand 5
B
1788 1791anti-parallel
Strand 6
B
1776 1781anti-parallel
Strand 7
B
1766 1771anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1748 1750first strand
Strand 2
B
1753 1755anti-parallel
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