Analysis of interatomic Contacts of Structural Units in PDB entry:
3PIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PIC entry

There are 3 chains in PDB entry 3PIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 99SER 460
B
 THR 95SER 460
C
 LEU 99SER 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 3PIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
125 144Right-handed alpha
Helix 2
2
A
214 219Right-handed alpha
Helix 3
3
A
223 227Right-handed 310
Helix 4
4
A
230 237Right-handed alpha
Helix 5
5
A
243 262Right-handed alpha
Helix 6
6
A
263 265Right-handed 310
Helix 7
7
A
278 291Right-handed alpha
Helix 8
8
A
309 319Right-handed alpha
Helix 9
9
A
325 330Right-handed alpha
Helix 10
10
A
337 343Right-handed 310
Helix 11
11
A
346 350Right-handed 310
Helix 12
12
A
353 360Right-handed alpha
Helix 13
13
A
373 376Right-handed 310
Helix 14
14
A
377 395Right-handed alpha
Helix 15
15
A
397 399Right-handed 310
Helix 16
16
A
415 417Right-handed 310
Helix 17
17
A
418 430Right-handed alpha
Helix 18
18
A
447 452Right-handed alpha
Helix 19
19
B
125 144Right-handed alpha
Helix 20
20
B
214 219Right-handed alpha
Helix 21
21
B
223 227Right-handed 310
Helix 22
22
B
230 237Right-handed alpha
Helix 23
23
B
243 262Right-handed alpha
Helix 24
24
B
263 265Right-handed 310
Helix 25
25
B
280 291Right-handed alpha
Helix 26
26
B
309 319Right-handed alpha
Helix 27
27
B
325 330Right-handed alpha
Helix 28
28
B
337 343Right-handed 310
Helix 29
29
B
346 350Right-handed 310
Helix 30
30
B
353 360Right-handed alpha
Helix 31
31
B
373 376Right-handed 310
Helix 32
32
B
377 395Right-handed alpha
Helix 33
33
B
397 399Right-handed 310
Helix 34
34
B
415 417Right-handed 310
Helix 35
35
B
418 430Right-handed alpha
Helix 36
36
B
447 452Right-handed alpha
Helix 37
37
C
125 144Right-handed alpha
Helix 38
38
C
214 219Right-handed alpha
Helix 39
39
C
223 227Right-handed 310
Helix 40
40
C
230 237Right-handed alpha
Helix 41
41
C
243 262Right-handed alpha
Helix 42
42
C
263 265Right-handed 310
Helix 43
43
C
278 291Right-handed alpha
Helix 44
44
C
309 320Right-handed alpha
Helix 45
45
C
325 330Right-handed alpha
Helix 46
46
C
337 343Right-handed 310
Helix 47
47
C
346 350Right-handed 310
Helix 48
48
C
353 360Right-handed alpha
Helix 49
49
C
373 376Right-handed 310
Helix 50
50
C
377 395Right-handed alpha
Helix 51
51
C
397 399Right-handed 310
Helix 52
52
C
415 417Right-handed 310
Helix 53
53
C
418 430Right-handed alpha
Helix 54
54
C
447 452Right-handed alpha
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There are 3 sheets in PDB entry 3PIC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 160first strand
Strand 2
A
163 170anti-parallel
Strand 3
A
173 182anti-parallel
Strand 4
A
209 213anti-parallel
Strand 5
A
191 197parallel
Strand 6
A
267 277parallel
Strand 7
A
294 300parallel
Strand 8
A
365 369parallel
Strand 9
A
401 404parallel
Strand 10
A
440 441parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 160first strand
Strand 2
B
163 170anti-parallel
Strand 3
B
173 182anti-parallel
Strand 4
B
209 213anti-parallel
Strand 5
B
191 197parallel
Strand 6
B
267 277parallel
Strand 7
B
294 300parallel
Strand 8
B
365 369parallel
Strand 9
B
401 404parallel
Strand 10
B
440 441parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
154 160first strand
Strand 2
C
163 170anti-parallel
Strand 3
C
173 182anti-parallel
Strand 4
C
209 213anti-parallel
Strand 5
C
191 197parallel
Strand 6
C
267 277parallel
Strand 7
C
294 300parallel
Strand 8
C
365 370parallel
Strand 9
C
401 405parallel
Strand 10
C
440 441parallel
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