Analysis of interatomic Contacts of Structural Units in PDB entry:
3PL2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PL2 entry

There are 4 chains in PDB entry 3PL2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6ASN 315
B
 SER 6ASN 315
C
 SER 6ASN 315
D
 SER 6LEU 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 3PL2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 32Right-handed 310
Helix 2
2
A
41 53Right-handed alpha
Helix 3
3
A
66 79Right-handed alpha
Helix 4
4
A
117 122Right-handed 310
Helix 5
5
A
123 127Right-handed 310
Helix 6
6
A
128 135Right-handed alpha
Helix 7
7
A
143 146Right-handed 310
Helix 8
8
A
149 162Right-handed alpha
Helix 9
9
A
174 178Right-handed 310
Helix 10
10
A
180 193Right-handed alpha
Helix 11
11
A
201 210Right-handed alpha
Helix 12
12
A
213 224Right-handed alpha
Helix 13
13
A
261 276Right-handed alpha
Helix 14
14
A
279 296Right-handed alpha
Helix 15
15
A
300 304Right-handed 310
Helix 16
16
A
306 314Right-handed alpha
Helix 17
17
B
28 32Right-handed 310
Helix 18
18
B
41 53Right-handed alpha
Helix 19
19
B
66 79Right-handed alpha
Helix 20
20
B
117 122Right-handed 310
Helix 21
21
B
123 127Right-handed 310
Helix 22
22
B
128 135Right-handed alpha
Helix 23
23
B
143 146Right-handed 310
Helix 24
24
B
149 162Right-handed alpha
Helix 25
25
B
174 178Right-handed 310
Helix 26
26
B
180 193Right-handed alpha
Helix 27
27
B
202 210Right-handed alpha
Helix 28
28
B
213 225Right-handed alpha
Helix 29
29
B
234 236Right-handed 310
Helix 30
30
B
261 276Right-handed alpha
Helix 31
31
B
279 296Right-handed alpha
Helix 32
32
B
300 304Right-handed 310
Helix 33
33
B
306 315Right-handed alpha
Helix 34
34
C
28 32Right-handed 310
Helix 35
35
C
41 53Right-handed alpha
Helix 36
36
C
66 79Right-handed alpha
Helix 37
37
C
117 122Right-handed 310
Helix 38
38
C
123 127Right-handed 310
Helix 39
39
C
128 135Right-handed alpha
Helix 40
40
C
143 146Right-handed 310
Helix 41
41
C
149 162Right-handed alpha
Helix 42
42
C
174 178Right-handed 310
Helix 43
43
C
180 194Right-handed alpha
Helix 44
44
C
201 210Right-handed alpha
Helix 45
45
C
213 224Right-handed alpha
Helix 46
46
C
234 236Right-handed 310
Helix 47
47
C
261 276Right-handed alpha
Helix 48
48
C
279 296Right-handed alpha
Helix 49
49
C
300 304Right-handed 310
Helix 50
50
C
306 315Right-handed alpha
Helix 51
51
D
41 53Right-handed alpha
Helix 52
52
D
66 79Right-handed alpha
Helix 53
53
D
117 122Right-handed 310
Helix 54
54
D
123 127Right-handed 310
Helix 55
55
D
128 135Right-handed alpha
Helix 56
56
D
143 146Right-handed 310
Helix 57
57
D
149 162Right-handed alpha
Helix 58
58
D
174 178Right-handed 310
Helix 59
59
D
180 193Right-handed alpha
Helix 60
60
D
202 210Right-handed alpha
Helix 61
61
D
213 224Right-handed alpha
Helix 62
62
D
261 276Right-handed alpha
Helix 63
63
D
279 296Right-handed alpha
Helix 64
64
D
300 304Right-handed 310
Helix 65
65
D
306 314Right-handed alpha
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There are 9 sheets in PDB entry 3PL2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
57 64parallel
Strand 3
A
86 89parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
57 64parallel
Strand 3
A
10 13parallel
Strand 4
A
137 141parallel
Strand 5
A
167 170parallel
Strand 6
A
197 200parallel
Strand 7
A
228 234parallel
Strand 8
A
237 241anti-parallel
Strand 9
A
246 249anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
17 20anti-parallel
Strand 3
A
96 99parallel
Strand 4
A
109 112anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 89first strand
Strand 2
B
57 64parallel
Strand 3
B
10 13parallel
Strand 4
B
137 141parallel
Strand 5
B
167 170parallel
Strand 6
B
197 201parallel
Strand 7
B
228 232parallel
Strand 8
B
238 241anti-parallel
Strand 9
B
246 249anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
17 20anti-parallel
Strand 3
B
96 99parallel
Strand 4
B
109 112anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 82first strand
Strand 2
C
57 64parallel
Strand 3
C
86 89parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 82first strand
Strand 2
C
57 64parallel
Strand 3
C
10 13parallel
Strand 4
C
137 141parallel
Strand 5
C
167 170parallel
Strand 6
C
197 200parallel
Strand 7
C
228 232parallel
Strand 8
C
238 241anti-parallel
Strand 9
C
246 249anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 112first strand
Strand 2
C
96 99anti-parallel
Strand 3
C
17 22parallel
Strand 4
C
34 40anti-parallel
Strand 5
D
34 40anti-parallel
Strand 6
D
17 22anti-parallel
Strand 7
D
96 99parallel
Strand 8
D
109 112anti-parallel
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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
86 89first strand
Strand 2
D
57 64parallel
Strand 3
D
10 13parallel
Strand 4
D
137 141parallel
Strand 5
D
167 170parallel
Strand 6
D
197 201parallel
Strand 7
D
228 234parallel
Strand 8
D
237 241anti-parallel
Strand 9
D
246 249anti-parallel
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