Analysis of interatomic Contacts of Structural Units in PDB entry:
3PLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PLZ entry

There are 4 chains in PDB entry 3PLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 300ALA 538
C
 LYS 740LYS 751
B
 SER 300ARG 540
D
 LYS 740LYS 751
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3PLZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
302 311Right-handed alpha
Helix 2
2
A
314 329Right-handed alpha
Helix 3
3
A
340 363Right-handed alpha
Helix 4
4
A
365 369Right-handed 310
Helix 5
5
A
370 398Right-handed alpha
Helix 6
6
A
413 418Right-handed alpha
Helix 7
7
A
421 441Right-handed alpha
Helix 8
8
A
444 457Right-handed alpha
Helix 9
9
A
466 489Right-handed alpha
Helix 10
10
A
494 501Right-handed alpha
Helix 11
11
A
501 523Right-handed alpha
Helix 12
12
A
530 537Right-handed alpha
Helix 13
13
C
742 751Right-handed alpha
Helix 14
14
B
302 311Right-handed alpha
Helix 15
15
B
314 332Right-handed alpha
Helix 16
16
B
340 363Right-handed alpha
Helix 17
17
B
365 369Right-handed 310
Helix 18
18
B
370 398Right-handed alpha
Helix 19
19
B
413 420Right-handed alpha
Helix 20
20
B
421 442Right-handed alpha
Helix 21
21
B
444 457Right-handed alpha
Helix 22
22
B
466 489Right-handed alpha
Helix 23
23
B
494 501Right-handed alpha
Helix 24
24
B
501 523Right-handed alpha
Helix 25
25
B
530 539Right-handed alpha
Helix 26
26
D
742 751Right-handed alpha
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There are 2 sheets in PDB entry 3PLZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 404first strand
Strand 2
A
410 412anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
402 404first strand
Strand 2
B
410 412anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il