Analysis of interatomic Contacts of Structural Units in PDB entry:
3PN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PN7 entry

There are 6 chains in PDB entry 3PN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 770LEU 837
B
 ARG 16SER 156
C
 LYS 2TYR 153
D
 ASN 769LEU 837
E
 ASN 12SER 156
F
 LYS 2PRO 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3PN7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
770 822Right-handed alpha
Helix 2
2
A
824 834Right-handed alpha
Helix 3
3
A
835 837Right-handed 310
Helix 4
4
B
18 33Right-handed alpha
Helix 5
5
B
41 53Right-handed alpha
Helix 6
6
B
57 67Right-handed alpha
Helix 7
7
B
73 86Right-handed alpha
Helix 8
8
B
90 100Right-handed alpha
Helix 9
9
B
111 121Right-handed alpha
Helix 10
10
B
126 135Right-handed alpha
Helix 11
11
B
145 155Right-handed alpha
Helix 12
12
C
4 22Right-handed alpha
Helix 13
13
C
32 40Right-handed alpha
Helix 14
14
C
45 52Right-handed alpha
Helix 15
15
C
65 76Right-handed alpha
Helix 16
16
C
82 92Right-handed alpha
Helix 17
17
C
103 113Right-handed alpha
Helix 18
18
C
118 129Right-handed alpha
Helix 19
19
C
141 151Right-handed alpha
Helix 20
20
D
770 797Right-handed alpha
Helix 21
21
D
797 822Right-handed alpha
Helix 22
22
D
824 834Right-handed alpha
Helix 23
23
D
835 837Right-handed 310
Helix 24
24
E
18 33Right-handed alpha
Helix 25
25
E
41 53Right-handed alpha
Helix 26
26
E
57 66Right-handed alpha
Helix 27
27
E
73 85Right-handed alpha
Helix 28
28
E
90 100Right-handed alpha
Helix 29
29
E
111 121Right-handed alpha
Helix 30
30
E
126 135Right-handed alpha
Helix 31
31
E
145 154Right-handed alpha
Helix 32
32
F
4 22Right-handed alpha
Helix 33
33
F
32 40Right-handed alpha
Helix 34
34
F
45 52Right-handed alpha
Helix 35
35
F
64 76Right-handed alpha
Helix 36
36
F
82 92Right-handed alpha
Helix 37
37
F
104 113Right-handed alpha
Helix 38
38
F
118 130Right-handed alpha
Helix 39
39
F
141 151Right-handed alpha
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There are 6 sheets in PDB entry 3PN7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 110first strand
Strand 2
B
143 144anti-parallel
Strand 3
B
139 140anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 29first strand
Strand 2
C
62 64anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 102first strand
Strand 2
C
138 140anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
109 110first strand
Strand 2
E
143 144anti-parallel
Strand 3
E
139 140anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
28 29first strand
Strand 2
F
62 63anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 101first strand
Strand 2
F
139 140anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il