Analysis of interatomic Contacts of Structural Units in PDB entry:
3PQH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PQH entry

There are 2 chains in PDB entry 3PQH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 138GLY 244
B
 GLU 138GLY 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3PQH

There are 3 sheets in PDB entry 3PQH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 195first strand
Strand 2
A
183 188anti-parallel
Strand 3
A
174 179anti-parallel
Strand 4
A
167 171anti-parallel
Strand 5
A
158 162anti-parallel
Strand 6
A
148 152anti-parallel
Strand 7
A
140 144anti-parallel
Strand 8
B
140 144anti-parallel
Strand 9
B
148 152anti-parallel
Strand 10
B
158 162anti-parallel
Strand 11
B
167 171anti-parallel
Strand 12
B
174 179anti-parallel
Strand 13
B
183 188anti-parallel
Strand 14
B
191 195anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 201first strand
Strand 2
A
204 206anti-parallel
Strand 3
A
212 213anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 201first strand
Strand 2
B
204 206anti-parallel
Strand 3
B
212 213anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il