Analysis of interatomic Contacts of Structural Units in PDB entry:
3PR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PR8 entry

There are 4 chains in PDB entry 3PR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLY 219
B
 SER 2SER 218
C
 SER 2GLY 219
D
 SER 2GLY 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 3PR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
38 45Right-handed alpha
Helix 3
3
A
62 74Right-handed alpha
Helix 4
4
A
83 101Right-handed alpha
Helix 5
5
A
101 107Right-handed alpha
Helix 6
6
A
108 115Right-handed alpha
Helix 7
7
A
119 141Right-handed alpha
Helix 8
8
A
153 174Right-handed alpha
Helix 9
9
A
177 181Right-handed 310
Helix 10
10
A
182 194Right-handed alpha
Helix 11
11
A
197 219Right-handed alpha
Helix 12
12
B
11 24Right-handed alpha
Helix 13
13
B
38 43Right-handed alpha
Helix 14
14
B
62 74Right-handed alpha
Helix 15
15
B
83 101Right-handed alpha
Helix 16
16
B
101 107Right-handed alpha
Helix 17
17
B
108 115Right-handed alpha
Helix 18
18
B
119 141Right-handed alpha
Helix 19
19
B
153 174Right-handed alpha
Helix 20
20
B
177 181Right-handed 310
Helix 21
21
B
182 194Right-handed alpha
Helix 22
22
B
197 218Right-handed alpha
Helix 23
23
C
11 24Right-handed alpha
Helix 24
24
C
38 45Right-handed alpha
Helix 25
25
C
62 74Right-handed alpha
Helix 26
26
C
83 101Right-handed alpha
Helix 27
27
C
101 107Right-handed alpha
Helix 28
28
C
108 115Right-handed alpha
Helix 29
29
C
119 141Right-handed alpha
Helix 30
30
C
153 174Right-handed alpha
Helix 31
31
C
177 181Right-handed 310
Helix 32
32
C
182 194Right-handed alpha
Helix 33
33
C
197 219Right-handed alpha
Helix 34
34
D
11 24Right-handed alpha
Helix 35
35
D
38 43Right-handed alpha
Helix 36
36
D
62 74Right-handed alpha
Helix 37
37
D
83 101Right-handed alpha
Helix 38
38
D
101 107Right-handed alpha
Helix 39
39
D
108 115Right-handed alpha
Helix 40
40
D
119 141Right-handed alpha
Helix 41
41
D
153 174Right-handed alpha
Helix 42
42
D
177 181Right-handed 310
Helix 43
43
D
182 194Right-handed alpha
Helix 44
44
D
197 219Right-handed alpha
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There are 4 sheets in PDB entry 3PR8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
4 7parallel
Strand 3
A
52 55anti-parallel
Strand 4
A
58 61anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
4 7parallel
Strand 3
B
52 55anti-parallel
Strand 4
B
58 61anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 32first strand
Strand 2
C
4 7parallel
Strand 3
C
52 55anti-parallel
Strand 4
C
58 61anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 32first strand
Strand 2
D
4 7parallel
Strand 3
D
52 55anti-parallel
Strand 4
D
58 61anti-parallel
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