Analysis of interatomic Contacts of Structural Units in PDB entry:
3PRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PRV entry

There are 6 chains in PDB entry 3PRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLU 151
B
 MET 1GLU 151
C
 MET 1GLU 151
D
 THR 2GLU 151
E
 THR 2GLU 151
F
 THR 2GLU 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 3PRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 17Right-handed alpha
Helix 2
2
A
19 31Right-handed alpha
Helix 3
3
A
43 52Right-handed alpha
Helix 4
4
A
60 68Right-handed alpha
Helix 5
5
A
81 91Right-handed alpha
Helix 6
6
A
94 98Right-handed 310
Helix 7
7
A
102 108Right-handed alpha
Helix 8
8
A
110 114Right-handed 310
Helix 9
9
A
121 133Right-handed alpha
Helix 10
10
A
134 138Right-handed 310
Helix 11
11
A
145 150Right-handed alpha
Helix 12
12
B
11 17Right-handed alpha
Helix 13
13
B
19 31Right-handed alpha
Helix 14
14
B
43 51Right-handed alpha
Helix 15
15
B
59 68Right-handed alpha
Helix 16
16
B
81 91Right-handed alpha
Helix 17
17
B
94 98Right-handed 310
Helix 18
18
B
102 108Right-handed alpha
Helix 19
19
B
110 114Right-handed 310
Helix 20
20
B
121 133Right-handed alpha
Helix 21
21
B
134 138Right-handed 310
Helix 22
22
B
145 150Right-handed alpha
Helix 23
23
C
11 17Right-handed alpha
Helix 24
24
C
19 30Right-handed alpha
Helix 25
25
C
43 51Right-handed alpha
Helix 26
26
C
60 68Right-handed alpha
Helix 27
27
C
81 91Right-handed alpha
Helix 28
28
C
94 98Right-handed 310
Helix 29
29
C
102 108Right-handed alpha
Helix 30
30
C
110 114Right-handed 310
Helix 31
31
C
121 133Right-handed alpha
Helix 32
32
C
134 138Right-handed 310
Helix 33
33
C
145 150Right-handed alpha
Helix 34
34
D
11 17Right-handed alpha
Helix 35
35
D
19 31Right-handed alpha
Helix 36
36
D
43 51Right-handed alpha
Helix 37
37
D
63 68Right-handed alpha
Helix 38
38
D
82 91Right-handed alpha
Helix 39
39
D
94 98Right-handed 310
Helix 40
40
D
102 108Right-handed alpha
Helix 41
41
D
110 114Right-handed 310
Helix 42
42
D
121 133Right-handed alpha
Helix 43
43
D
145 150Right-handed alpha
Helix 44
44
E
11 17Right-handed alpha
Helix 45
45
E
19 31Right-handed alpha
Helix 46
46
E
43 47Right-handed 310
Helix 47
47
E
81 91Right-handed alpha
Helix 48
48
E
94 98Right-handed 310
Helix 49
49
E
102 108Right-handed alpha
Helix 50
50
E
121 133Right-handed alpha
Helix 51
51
E
145 150Right-handed alpha
Helix 52
52
F
11 17Right-handed alpha
Helix 53
53
F
19 31Right-handed alpha
Helix 54
54
F
62 67Right-handed alpha
Helix 55
55
F
81 91Right-handed alpha
Helix 56
56
F
94 98Right-handed 310
Helix 57
57
F
102 108Right-handed alpha
Helix 58
58
F
110 114Right-handed 310
Helix 59
59
F
121 133Right-handed alpha
Helix 60
60
F
145 150Right-handed alpha
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There are 6 sheets in PDB entry 3PRV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 40first strand
Strand 2
A
72 78anti-parallel
Strand 3
A
5 10anti-parallel
Strand 4
A
116 118anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 40first strand
Strand 2
B
72 78anti-parallel
Strand 3
B
5 10anti-parallel
Strand 4
B
116 118anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 40first strand
Strand 2
C
72 78anti-parallel
Strand 3
C
5 10anti-parallel
Strand 4
C
116 118anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 40first strand
Strand 2
D
72 78anti-parallel
Strand 3
D
5 10anti-parallel
Strand 4
D
116 118anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 40first strand
Strand 2
E
72 78anti-parallel
Strand 3
E
5 10anti-parallel
Strand 4
E
116 118anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
33 40first strand
Strand 2
F
72 78anti-parallel
Strand 3
F
5 10anti-parallel
Strand 4
F
116 118anti-parallel
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