Analysis of interatomic Contacts of Structural Units in PDB entry:
3PSF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PSF entry

There is 1 chain in PDB entry 3PSF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 298ASN 942
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 3PSF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
300 309Right-handed alpha
Helix 2
2
A
311 320Right-handed alpha
Helix 3
3
A
323 330Right-handed alpha
Helix 4
4
A
331 333Right-handed 310
Helix 5
5
A
340 360Right-handed alpha
Helix 6
6
A
367 383Right-handed alpha
Helix 7
7
A
387 395Right-handed alpha
Helix 8
8
A
396 399Right-handed 310
Helix 9
9
A
410 442Right-handed alpha
Helix 10
10
A
445 455Right-handed alpha
Helix 11
11
A
464 477Right-handed alpha
Helix 12
12
A
477 484Right-handed alpha
Helix 13
13
A
501 506Right-handed alpha
Helix 14
14
A
510 516Right-handed alpha
Helix 15
15
A
520 531Right-handed alpha
Helix 16
16
A
544 555Right-handed alpha
Helix 17
17
A
567 584Right-handed alpha
Helix 18
18
A
585 599Right-handed alpha
Helix 19
19
A
607 614Right-handed alpha
Helix 20
20
A
632 637Right-handed alpha
Helix 21
21
A
638 650Right-handed alpha
Helix 22
22
A
661 674Right-handed alpha
Helix 23
23
A
680 734Right-handed alpha
Helix 24
24
A
792 807Right-handed alpha
Helix 25
25
A
818 834Right-handed alpha
Helix 26
26
A
853 859Right-handed alpha
Helix 27
27
A
860 867Right-handed alpha
Helix 28
28
A
871 886Right-handed alpha
Helix 29
29
A
886 893Right-handed alpha
Helix 30
30
A
895 901Right-handed alpha
Helix 31
31
A
907 911Right-handed 310
Helix 32
32
A
912 932Right-handed alpha
Helix 33
33
A
935 940Right-handed alpha
Helix 34
34
A
941 946Right-handed alpha
Helix 35
35
A
947 951Right-handed 310
Helix 36
36
A
955 969Right-handed alpha
Helix 37
37
A
977 982Right-handed alpha
Helix 38
38
A
986 994Right-handed alpha
Helix 39
39
A
1014 1019Right-handed 310
Helix 40
40
A
1022 1024Right-handed 310
Helix 41
41
A
1025 1037Right-handed alpha
Helix 42
42
A
1040 1051Right-handed alpha
Helix 43
43
A
1054 1063Right-handed alpha
Helix 44
44
A
1065 1071Right-handed alpha
Helix 45
45
A
1074 1087Right-handed alpha
Helix 46
46
A
1090 1103Right-handed alpha
Helix 47
47
A
1116 1126Right-handed alpha
Helix 48
48
A
1226 1247Right-handed alpha
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There are 3 sheets in PDB entry 3PSF. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
600 606first strand
Strand 2
A
653 659anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
776 782first strand
Strand 2
A
765 770anti-parallel
Strand 3
A
750 754anti-parallel
Strand 4
A
810 813parallel
Strand 5
A
846 848parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
933 934first strand
Strand 2
A
997 998parallel
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