Analysis of interatomic Contacts of Structural Units in PDB entry:
3PW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PW8 entry

There are 4 chains in PDB entry 3PW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2TRP 248
B
 ASN 2TRP 248
C
 THR 2LYS 302
D
 THR 2LYS 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3PW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 24Right-handed alpha
Helix 2
2
A
31 61Right-handed alpha
Helix 3
3
A
64 71Right-handed alpha
Helix 4
4
A
80 85Right-handed alpha
Helix 5
5
A
89 112Right-handed alpha
Helix 6
6
A
116 146Right-handed alpha
Helix 7
7
A
148 163Right-handed alpha
Helix 8
8
A
164 170Right-handed 310
Helix 9
9
A
173 182Right-handed alpha
Helix 10
10
A
187 190Right-handed 310
Helix 11
11
A
191 206Right-handed alpha
Helix 12
12
A
219 223Right-handed 310
Helix 13
13
A
228 243Right-handed alpha
Helix 14
14
B
2 24Right-handed alpha
Helix 15
15
B
31 61Right-handed alpha
Helix 16
16
B
64 71Right-handed alpha
Helix 17
17
B
80 85Right-handed alpha
Helix 18
18
B
89 113Right-handed alpha
Helix 19
19
B
116 146Right-handed alpha
Helix 20
20
B
148 163Right-handed alpha
Helix 21
21
B
164 170Right-handed 310
Helix 22
22
B
173 181Right-handed alpha
Helix 23
23
B
191 205Right-handed alpha
Helix 24
24
B
219 223Right-handed 310
Helix 25
25
B
228 243Right-handed alpha
Helix 26
26
C
2 14Right-handed alpha
Helix 27
27
C
24 45Right-handed alpha
Helix 28
28
C
45 51Right-handed alpha
Helix 29
29
C
58 85Right-handed alpha
Helix 30
30
C
89 99Right-handed alpha
Helix 31
31
C
105 110Right-handed 310
Helix 32
32
C
114 135Right-handed alpha
Helix 33
33
C
141 171Right-handed alpha
Helix 34
34
C
173 193Right-handed alpha
Helix 35
35
C
194 196Right-handed 310
Helix 36
36
C
204 211Right-handed alpha
Helix 37
37
C
217 237Right-handed alpha
Helix 38
38
C
260 269Right-handed alpha
Helix 39
39
C
274 289Right-handed alpha
Helix 40
40
C
289 300Right-handed alpha
Helix 41
41
D
2 14Right-handed alpha
Helix 42
42
D
24 45Right-handed alpha
Helix 43
43
D
45 51Right-handed alpha
Helix 44
44
D
58 85Right-handed alpha
Helix 45
45
D
89 99Right-handed alpha
Helix 46
46
D
105 110Right-handed 310
Helix 47
47
D
114 135Right-handed alpha
Helix 48
48
D
141 171Right-handed alpha
Helix 49
49
D
173 193Right-handed alpha
Helix 50
50
D
194 196Right-handed 310
Helix 51
51
D
204 211Right-handed alpha
Helix 52
52
D
217 236Right-handed alpha
Helix 53
53
D
249 252Right-handed 310
Helix 54
54
D
260 269Right-handed alpha
Helix 55
55
D
274 289Right-handed alpha
Helix 56
56
D
289 300Right-handed alpha
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There are 2 sheets in PDB entry 3PW8. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
246 247first strand
Strand 2
C
254 255anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
246 247first strand
Strand 2
D
254 255anti-parallel
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