Analysis of interatomic Contacts of Structural Units in PDB entry:
3PWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PWZ entry

There is 1 chain in PDB entry 3PWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLU 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3PWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 28Right-handed alpha
Helix 2
2
A
43 54Right-handed alpha
Helix 3
3
A
65 73Right-handed alpha
Helix 4
4
A
77 84Right-handed alpha
Helix 5
5
A
101 112Right-handed alpha
Helix 6
6
A
129 142Right-handed alpha
Helix 7
7
A
153 165Right-handed alpha
Helix 8
8
A
174 178Right-handed 310
Helix 9
9
A
190 195Right-handed 310
Helix 10
10
A
201 206Right-handed 310
Helix 11
11
A
221 231Right-handed alpha
Helix 12
12
A
238 255Right-handed alpha
Helix 13
13
A
260 268Right-handed alpha
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There are 2 sheets in PDB entry 3PWZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
3 9parallel
Strand 3
A
58 61parallel
Strand 4
A
88 92anti-parallel
Strand 5
A
95 99anti-parallel
Strand 6
A
75 76parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 172first strand
Strand 2
A
146 150parallel
Strand 3
A
122 126parallel
Strand 4
A
184 187parallel
Strand 5
A
210 213parallel
Strand 6
A
234 236parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il