Analysis of interatomic Contacts of Structural Units in PDB entry:
3PY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PY7 entry

There is 1 chain in PDB entry 3PY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3HIS 516
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3PY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 33Right-handed alpha
Helix 2
2
A
43 54Right-handed alpha
Helix 3
3
A
67 74Right-handed alpha
Helix 4
4
A
83 88Right-handed alpha
Helix 5
5
A
91 98Right-handed alpha
Helix 6
6
A
129 131Right-handed 310
Helix 7
7
A
132 142Right-handed alpha
Helix 8
8
A
154 165Right-handed alpha
Helix 9
9
A
186 202Right-handed alpha
Helix 10
10
A
210 220Right-handed alpha
Helix 11
11
A
229 231Right-handed 310
Helix 12
12
A
232 239Right-handed alpha
Helix 13
13
A
273 284Right-handed alpha
Helix 14
14
A
287 298Right-handed alpha
Helix 15
15
A
305 313Right-handed alpha
Helix 16
16
A
315 327Right-handed alpha
Helix 17
17
A
336 353Right-handed alpha
Helix 18
18
A
357 371Right-handed alpha
Helix 19
19
A
372 379Right-handed alpha
Helix 20
20
A
411 421Right-handed alpha
Helix 21
21
A
436 451Right-handed alpha
Helix 22
22
A
457 465Right-handed alpha
Helix 23
23
A
468 472Right-handed 310
Helix 24
24
A
484 494Right-handed alpha
Helix 25
25
A
502 504Right-handed 310
Helix 26
26
A
510 514Right-handed 310
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There are 8 sheets in PDB entry 3PY7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 39first strand
Strand 2
A
7 11parallel
Strand 3
A
60 64parallel
Strand 4
A
259 267anti-parallel
Strand 5
A
107 112anti-parallel
Strand 6
A
302 303anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 39first strand
Strand 2
A
7 11parallel
Strand 3
A
60 64parallel
Strand 4
A
259 267anti-parallel
Strand 5
A
329 330parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 100first strand
Strand 2
A
103 104anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
223 228parallel
Strand 3
A
115 119anti-parallel
Strand 4
A
243 246anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 173first strand
Strand 2
A
176 183anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 251first strand
Strand 2
A
254 255anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 403first strand
Strand 2
A
431 434parallel
Strand 3
A
426 428anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 456first strand
Strand 2
A
498 500anti-parallel
Strand 3
A
506 508anti-parallel
Strand 4
A
475 476parallel
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